DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and gsp-1

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:298 Identity:136/298 - (45%)
Similarity:197/298 - (66%) Gaps:10/298 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DLDQWIEQLNE---CN-----QLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDL 65
            ::|..|.:|.|   |.     .::|.::|.||.|::||...:..:.|::.|:.:|||:|||::||
 Worm     8 NIDNLITRLLEVRGCRPGKPVTMSEAEIRALCHKSREIFLSQPILLELEAPLKICGDIHGQYNDL 72

  Fly    66 MELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFY 130
            :.||..||..|:.||||:|||||||..|:||:.||:|.||:|.|...:||||||...|.::||||
 Worm    73 LRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFY 137

  Fly   131 DECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPM 195
            |||.|:: :..:||.|||.|:.||:.||:|.:|||.||||||.:.:::.||.:.|..:||..|.:
 Worm   138 DECKRRF-SIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLL 201

  Fly   196 CDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTI 259
            ||||||||| |..|||.:.||..:|||.|:...|.|.:.|.|:.||||:|.:||.:...|.:||:
 Worm   202 CDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTL 266

  Fly   260 FSAPNYCYRCGNQAALMELDDSLKFSFLQFDPAPRRGE 297
            |||||||....|...:|.:|::|..||....|:.::.:
 Worm   267 FSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAK 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 136/292 (47%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 135/290 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.