DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and pph-4.1

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_499603.1 Gene:pph-4.1 / 176657 WormBaseID:WBGene00004085 Length:333 Species:Caenorhabditis elegans


Alignment Length:314 Identity:198/314 - (63%)
Similarity:251/314 - (79%) Gaps:12/314 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKATTKDLDQWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLME 67
            |:.||.|||:.||:|..|..:.|..|:|||.||:|||::|.|||.:..|||:|||:||||:||||
 Worm    25 DQLTTHDLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLME 89

  Fly    68 LFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDE 132
            ||::||..|:|||||:||:||||:|||||..||:|||.||.:|:.::||||||||||||||||||
 Worm    90 LFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDE 154

  Fly   133 CLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCD 197
            ||||||||:|||:.|::||||.|.|::||::||:||||||||.::|.||.:||.|||||:|||||
 Worm   155 CLRKYGNASVWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCD 219

  Fly   198 LLWSDPDDRG-GWGISPRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFS 261
            ||||||::.. |||:|||||||.||.|.|:||..|||:.|:.||||||||||.|..:..|:|::|
 Worm   220 LLWSDPEEGNVGWGLSPRGAGYLFGADASKTFCETNGVDLICRAHQLVMEGYKWHFNEKVLTVWS 284

  Fly   262 APNYCYRCGNQAALMELDDSLKFSFLQFDPAPR--RG----EPHVTRRTPDYFL 309
            ||||||||||.||::|||::|...|..|:.||:  ||    :||.     ||||
 Worm   285 APNYCYRCGNVAAILELDENLNKEFTIFEAAPQENRGAPAKKPHA-----DYFL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 185/284 (65%)
pph-4.1NP_499603.1 PTZ00239 31..333 CDD:173488 193/306 (63%)
MPP_PP2A_PP4_PP6 31..316 CDD:277360 185/284 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D349967at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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