DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and pef-1

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_741091.1 Gene:pef-1 / 175257 WormBaseID:WBGene00003969 Length:707 Species:Caenorhabditis elegans


Alignment Length:338 Identity:102/338 - (30%)
Similarity:163/338 - (48%) Gaps:49/338 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDKATTK-DLD------------------QWIEQLNECNQLTETQVRTLCDKAKEILSKESNVQ 46
            :||.:.|. |:|                  :.||.......|....|..:..:|::|.....:|.
 Worm   177 LEDTSPTNVDIDRNYKGPTLSLPLDKPQVAKMIEAFKVNKVLHPKYVLMILHEARKIFKAMPSVS 241

  Fly    47 EVKC----PVTVCGDVHGQFHDL-MELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVR 106
            .:..    .||:|||:||:|.|| :.|::.|..|.|..|:|.||:||||..|:|.:.:|.||.:.
 Worm   242 RISTSISNQVTICGDLHGKFDDLCIILYKNGYPSVDNPYIFNGDFVDRGGQSIEVLCVLFALVIV 306

  Fly   107 YRERITILRGNHESRQITQVYGFYDECLRKYGNAN--VWKYFTDLFDYLPLTALVDGQIFCLHGG 169
            ....|.:.|||||...:...|||..|...||.:.:  :.:...|:|.:||:..::|..||.:|||
 Worm   307 DPMSIYLNRGNHEDHIMNLRYGFIKELSTKYKDLSTPITRLLEDVFSWLPIATIIDRDIFVVHGG 371

  Fly   170 LS--PSIDSLDHI--------------RALDRLQE-----VPHEGPMCDLLWSDP-DDRGGWGIS 212
            :|  ..:..||.|              :.::..:|     |.....|.|::|||| .::|.|...
 Worm   372 ISDQTEVSKLDKIPRHRFQSVLRPPVNKGMESEKENSAVNVDEWKQMLDIMWSDPKQNKGCWPNV 436

  Fly   213 PRGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAALME 277
            .||.|..||.||:.:|...:|..|:.|:|:...|||.:.|:...:|:|||.||.....|:.|.::
 Worm   437 FRGGGSYFGADITASFLEKHGFRLLVRSHECKFEGYEFSHNNTCLTVFSASNYYETGSNRGAYVK 501

  Fly   278 -LDDSLKFSFLQF 289
             :..|.:..|:|:
 Worm   502 FIGKSKQPHFVQY 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 99/329 (30%)
pef-1NP_741091.1 MPP_RdgC 199..515 CDD:277364 97/316 (31%)
PP2Ac 218..514 CDD:197547 94/295 (32%)
EFh 634..699 CDD:238008
EF-hand_7 634..698 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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