DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and gsp-3

DIOPT Version :10

Sequence 1:NP_476805.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:278 Identity:120/278 - (43%)
Similarity:183/278 - (65%) Gaps:4/278 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LTETQVRTLCDKAKEILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYV 87
            :.|.:::|.|..||.:.:.::::.||:.|:.||||:|||:.||:.:|...|..||.|:||:||||
 Worm    28 VNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDVNFLFLGDYV 92

  Fly    88 DRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDY 152
            |||..::||:.|::..|::|.|...:||||||...|.:|||||:||.|:|.:..:|..|.|.|::
 Worm    93 DRGRQNIETICLMLCFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIFQDTFNW 157

  Fly   153 LPLTALVDGQIFCLHGGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDPDD-RGGWGISPRGA 216
            :||..|:..:|.|:||||||.:.:||.:|.|.|.|:.|:.....||||:|||. ..||..:.||.
 Worm   158 MPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADPDQWVKGWQANTRGV 222

  Fly   217 GYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELDDS 281
            .|.||||:.....:...:.||:||||:|.:||.:...:.:|||||||:||.:..|.||.|::|::
 Worm   223 SYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKKMVTIFSAPHYCGQFDNSAATMKVDEN 287

  Fly   282 LKFSFLQFDPAP---RRG 296
            :..:|:.:.|.|   |||
 Worm   288 MVCTFVMYKPTPKSMRRG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_476805.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 116/270 (43%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:472684 115/268 (43%)

Return to query results.
Submit another query.