DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mts and Ppp3cc

DIOPT Version :9

Sequence 1:NP_001285724.1 Gene:mts / 45959 FlyBaseID:FBgn0004177 Length:309 Species:Drosophila melanogaster
Sequence 2:XP_008769035.1 Gene:Ppp3cc / 171378 RGDID:621616 Length:515 Species:Rattus norvegicus


Alignment Length:270 Identity:117/270 - (43%)
Similarity:161/270 - (59%) Gaps:16/270 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ILSKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVA 102
            ||.:|..:.||:.|:||||||||||.|||:||.:||...:|.|||:||||||||:|:|.|..|.:
  Rat    67 ILKQEKTMLEVEAPITVCGDVHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIECVLYLWS 131

  Fly   103 LKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLH 167
            ||:.:.:.:.:||||||.|.:|:.:.|..||..||... |::.....||.|||.||::.|..|:|
  Rat   132 LKINHPKTLFLLRGNHECRHLTEYFTFKQECRIKYSEL-VYEACMHTFDCLPLAALLNQQFLCVH 195

  Fly   168 GGLSPSIDSLDHIRALDRLQEVPHEGPMCDLLWSDP-DDRGGWGI-------SPRGAGYTFGQDI 224
            ||:||.|..||.||.|||..|.|..||:|||||||| :|.|....       :.||..|.|....
  Rat   196 GGMSPEITCLDDIRKLDRFAEPPAFGPVCDLLWSDPLEDYGSEKTLEHYTHNTVRGCSYFFSYPA 260

  Fly   225 SETFNNTNGLTLVSRAHQLVMEGYNWCHDR------NVVTIFSAPNYCYRCGNQAALMELDDSLK 283
            ...|...|.|..:.|||:....||......      :::||||||||.....|:||:::.:::: 
  Rat   261 VCEFLQNNSLLSIIRAHEAQDAGYRMYRKNQATGFPSLITIFSAPNYLDVYNNKAAVLKYENNV- 324

  Fly   284 FSFLQFDPAP 293
            .:..||:.:|
  Rat   325 MNIRQFNCSP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtsNP_001285724.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 116/268 (43%)
Ppp3ccXP_008769035.1 MPP_PP2B 37..341 CDD:277361 117/270 (43%)
PP2Ac 54..325 CDD:197547 114/259 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.