DRSC/TRiP Functional Genomics Resources

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Protein Alignment MUSK and Cad96Ca

DIOPT Version :10

Sequence 1:XP_005252051.1 Gene:MUSK / 4593 HGNCID:7525 Length:879 Species:Homo sapiens
Sequence 2:NP_651349.1 Gene:Cad96Ca / 43026 FlyBaseID:FBgn0022800 Length:773 Species:Drosophila melanogaster


Alignment Length:512 Identity:143/512 - (27%)
Similarity:223/512 - (43%) Gaps:106/512 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   448 PSMHWDPTACARL------------PHLDYNKENLKTFPPMTSSKPSVDIPNLPSSSSSSFSV-S 499
            |.....||...|:            |....|...:::..|..::.||....|..||..:.||: |
  Fly   249 PDEEVTPTTPVRISSTTPKSRTKLTPITANNSTRVESAIPAETTTPSGGHHNNSSSPITIFSLKS 313

Human   500 PTYSMTVIISIMSSFAIFVLLTITTLYCCRRR--------KQWKNKKRESAAVTLTTLPSELLLD 556
            .|..:.|.:.     ..||.:.:...|.||||        |:.|.|:..:.....:.|.|.|..|
  Fly   314 GTIPIVVTVG-----GFFVAIAVLLAYLCRRRLCAISRTLKKTKEKEELAKKSNQSQLSSTLTDD 373

Human   557 ------------------RLHPNPMYQRMPLL-----------------------------LNPK 574
                              |..|....|:|.:.                             |.|.
  Fly   374 SRNSMVMQQWQGPVAFANRYVPWERDQQMGIATSQLSTGVTNGGVSSPGVPSPGTGEPGSNLGPG 438

Human   575 LLS---------------------LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAV 618
            .|:                     .|:||..:::...:||||||:|::..|..:...|..|.|||
  Fly   439 CLTGGAGSSGAPENAFAGEANCDRWEFPRYRLKFFNILGEGAFGQVWRCEATNINGNEGITTVAV 503

Human   619 KMLKEEASADMQADFQREAALMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSP 682
            |.|||.|:...:.|...|..:|...: :.|:|.|||.|....|..::.||:..|.|..:|||...
  Fly   504 KTLKESATEVDRKDLLSELEVMKSLEPHINVVHLLGCCTDKDPTFVILEYVNRGKLQTYLRSSRA 568

Human   683 HTVCSLSHSDLSMRAQVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM 747
            ......:|...::           |:..:......|||.||.||:.|..:|||||.||.|:.::.
  Fly   569 ERHYGNTHGKSNV-----------LTSCDLTSFMYQVAKGMDYLTSRGIIHRDLAARNILITDDH 622

Human   748 VVKIADFGLSRNIYSADYYKANENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 812
            ..|:||||.:|::.::..|:......:|||||..||::.|.::.:||:|::|:::|||.:.|..|
  Fly   623 TCKVADFGFARDVITSKIYERKSEGKLPIRWMATESLYDNIFSVKSDIWSFGILMWEIVTLGSTP 687

Human   813 YYGMAHEEVIYYVRDGNILSCPENCPVELYNLMRLCWSKLPADRPSFTSIHRILERM 869
            |.|::..:|:..||||..|..||:|..||||:|..|||..|.:||.|..|.::|:::
  Fly   688 YPGISAADVMRKVRDGYRLEKPEHCRRELYNIMYYCWSHDPQERPLFAEIIQMLDKL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MUSKXP_005252051.1 IgI_1_MuSK 28..117 CDD:409562
Ig strand A 28..31 CDD:409562
Ig strand A' 35..39 CDD:409562
Ig strand B 45..52 CDD:409562
Ig strand C 58..63 CDD:409562
Ig strand C' 65..67 CDD:409562
Ig strand D 75..78 CDD:409562
Ig strand E 82..88 CDD:409562
Ig strand F 95..102 CDD:409562
Ig strand G 109..117 CDD:409562
Ig 122..206 CDD:472250
Ig strand B 138..142 CDD:409353
Ig strand C 151..155 CDD:409353
Ig strand E 173..177 CDD:409353
Ig strand F 187..192 CDD:409353
Ig strand G 201..204 CDD:409353
Ig_3 228..296 CDD:464046
CRD_FZ 325..467 CDD:470581 5/30 (17%)
PTKc_Musk 579..868 CDD:133181 105/289 (36%)
Cad96CaNP_651349.1 Cadherin_repeat 65..164 CDD:206637
PTKc 474..742 CDD:270623 101/278 (36%)
Blue background indicates that the domain is not in the aligned region.

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