DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and DNM1

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_013100.1 Gene:DNM1 / 850686 SGDID:S000003924 Length:757 Species:Saccharomyces cerevisiae


Alignment Length:819 Identity:303/819 - (36%)
Similarity:443/819 - (54%) Gaps:130/819 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLI 65
            ::.||..||||||.....|:. .||||.:||||.||:||||:||..||:||||||:||||||||:
Yeast     4 LEDLIPTVNKLQDVMYDSGID-TLDLPILAVVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLV 67

  Fly    66 LQL-------------------------ING-----------------VTEYGEFLHIKGKKFSS 88
            |||                         |:|                 ..|:||||||.||:|..
Yeast    68 LQLNNISPNSPLIEEDDNSVNPHDEVTKISGFEAGTKPLEYRGKERNHADEWGEFLHIPGKRFYD 132

  Fly    89 FDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQ 153
            ||:|::|||:||.|:.|.:||||.|||||:|:|||||||||:||||:|||.||:||.|||:|||.
Yeast   133 FDDIKREIENETARIAGKDKGISKIPINLKVFSPHVLNLTLVDLPGITKVPIGEQPPDIEKQIKN 197

  Fly   154 MIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK 218
            :|..:|....||||||:|||.||.||::||||:||||||.|||||||||||||.||:|.|||..|
Yeast   198 LILDYIATPNCLILAVSPANVDLVNSESLKLAREVDPQGKRTIGVITKLDLMDSGTNALDILSGK 262

  Fly   219 LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVLNQQLTNH 283
            :.||:.|::|||||||:||:..|.:.::|..|..:|..||.||.::.:.||.||.::|||.|.:|
Yeast   263 MYPLKLGFVGVVNRSQQDIQLNKTVEESLDKEEDYFRKHPVYRTISTKCGTRYLAKLLNQTLLSH 327

  Fly   284 IRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSDFERTIEGSGSALVN 348
            |||.||.::.||...:...|:|:..:..........:...:||::.:..::|..:|:|:.|. :|
Yeast   328 IRDKLPDIKTKLNTLISQTEQELARYGGVGATTNESRASLVLQLMNKFSTNFISSIDGTSSD-IN 391

  Fly   349 TNELSGGAKI----NRIFHERLRFEIVKMACDEKELRREISFAIRNIHGIRVGLFTPDMAFEAIV 409
            |.||.|||:|    |.:|...|:  .:....:...|  ::..||||..|.|..||.|::||:.:|
Yeast   392 TKELCGGARIYYIYNNVFGNSLK--SIDPTSNLSVL--DVRTAIRNSTGPRPTLFVPELAFDLLV 452

  Fly   410 KRQIALLKEPVIKCVDLVVQELSVVVRMC-TAKMSRYPRLREETERIITTHVRQREHSCKEQILL 473
            |.||.||.||..:||:||.:||..:...| :|:::|||:|:.....:|:..:|:|....:..:..
Yeast   453 KPQIKLLLEPSQRCVELVYEELMKICHKCGSAELARYPKLKSMLIEVISELLRERLQPTRSYVES 517

  Fly   474 LIDFELAYMNTNHEDFIGFANAQNKSENANKTGTRQLGNQVIRKGHMVIQNLGIMKDIKLGRSGP 538
            |||...||:||||.:|:....|.:     :...||:..||.:.|..:..|..|            
Yeast   518 LIDIHRAYINTNHPNFLSATEAMD-----DIMKTRRKRNQELLKSKLSQQENG------------ 565

  Fly   539 LNVRFFSPSTGGSRPYWFVLTSESISWYKDED-----------------EKEKKFMLPLDGLKLR 586
                    .|.|      :..:.|||...|:|                 :.:.||:....| |.:
Yeast   566 --------QTNG------INGTSSISSNIDQDSAKNSDYDDDGIDAESKQTKDKFLNYFFG-KDK 615

  Fly   587 DIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEKQETQENG 651
            ..:..|.:..::.:.|     |....:|::.|::|..::.|::.                 .||.
Yeast   616 KGQPVFDASDKKRSIA-----GDGNIEDFRNLQISDFSLGDIDD-----------------LENA 658

  Fly   652 DESASEESSSDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLY 716
            :...:|..      |.:.|.|:.|:.||..|:.:...|.||||:|.|::|..||.:...|:..||
Yeast   659 EPPLTERE------ELECELIKRLIVSYFDIIREMIEDQVPKAVMCLLVNYCKDSVQNRLVTKLY 717

  Fly   717 ASGDQAQMMEESAESATRREEMLRMYRACKDALQIIGDV 755
            ......:::.|....|..||..::.....|.|..:|.::
Yeast   718 KETLFEELLVEDQTLAQDRELCVKSLGVYKKAATLISNI 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 159/280 (57%)
CrfC 73..>498 CDD:223771 202/429 (47%)
Dynamin_M 212..498 CDD:279383 105/290 (36%)
PH_dynamin 512..644 CDD:269958 23/148 (16%)
PH 552..638 CDD:278594 16/102 (16%)
GED 664..755 CDD:128597 27/90 (30%)
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
DNM1NP_013100.1 DLP_1 26..333 CDD:206738 170/306 (56%)
Dynamin_M 255..540 CDD:395818 105/289 (36%)
GED 665..756 CDD:128597 27/96 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 240 1.000 Domainoid score I373
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100232
Panther 1 1.100 - - O PTHR11566
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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