DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and ADL6

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_172500.1 Gene:ADL6 / 837568 AraportID:AT1G10290 Length:914 Species:Arabidopsis thaliana


Alignment Length:932 Identity:210/932 - (22%)
Similarity:372/932 - (39%) Gaps:209/932 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLILQLI--NGVTEYGEFLHIKGKKFS-SFD 90
            :..:|...||||:||.:.:|...||.|....||.|:|::|.  :.::.....|.|..|... |..
plant    41 VVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPIIIELSRESSLSSKAIILQIDNKSQQVSAS 105

  Fly    91 EIRKEIEDETDR-VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQI--K 152
            .:|..::|...: .:|.|:.    .|||::.:.....|.|:|||||            :|:|  :
plant   106 ALRHSLQDRLSKGASGKNRD----EINLKLRTSTAPPLKLVDLPGL------------DQRIVDE 154

  Fly   153 QMIFQFIRKETCLILAVTPAN--TDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDA---- 211
            .||.::.:....::|.:.||:  :::::|.|||:|||.||:..||||:|.|:|...|.:.|    
plant   155 SMIAEYAQHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKIDQAAENSKALAAV 219

  Fly   212 RDILENKLLPLRRG--YIGVVNR-----SQKDIEGRKDIHQALAAE----RKFFLSHPSYRHMAD 265
            :.:|.|:..|....  ::.|:.:     |.:...|...:..|..||    :......|.     .
plant   220 QALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQ-----S 279

  Fly   266 RLGTPYLQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEV----EEFKHFQPGDASIKTKAMLQ 326
            :||...|...|..|:.:.::..||.:...||.:...::.|:    |:..:...|..:|    .|:
plant   280 KLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGTRAI----ALE 340

  Fly   327 MIQQLQSDFERTI---EGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAI 388
            :.::.:..|...:   ||||..:|.:.|   |...|||                |:|..:..|.:
plant   341 LCREFEDKFLLHLAGGEGSGWKVVASFE---GNFPNRI----------------KQLPLDRHFDL 386

  Fly   389 RNI-------HGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRM---CTAKMS 443
            .|:       .|.:..|.:|:....:::|..:.|.|:|...|||.|.:.|..:|..   .|..:.
plant   387 NNVKRVVLEADGYQPYLISPEKGLRSLIKIVLELAKDPARLCVDEVHRVLVDIVSASANATPGLG 451

  Fly   444 RYPRLREETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR 508
            |||..:.|...|.:..:...::..|:.::.|:|.|.|::...|  ||..  .|.:.|...:  ..
plant   452 RYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQH--FIRL--VQRRMERQRR--EE 510

  Fly   509 QLGNQVIRKGHMVIQNL---------------GIMKDIK------------------LGRSGPLN 540
            :|..:..:||....|:|               |.:|.:|                  .|..|.:.
plant   511 ELKGRSSKKGQDAEQSLLSRATSPQPDGPTAGGSLKSMKDKPSPQDKETPEVSGLKTAGPEGEIT 575

  Fly   541 VRFF---SPSTGGSRPYWFVLTSES--ISWYKDEDEKEKKFMLPLDGLKLRDI-----EQGFMSM 595
            ..:.   |..|.|....||||..::  :.:.|.::|:..:..:.|:...:.:|     |:...|.
plant   576 AGYLMKKSAKTNGWSRRWFVLNEKTGKLGYTKKQEERNFRGTITLEECTIEEIPEDEVEKSKSSK 640

  Fly   596 SRRVTFALFSPDG---------------RNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEKQ 645
            .::..    .||.               :.|.|.:..|.|..|:|.|...|        :...::
plant   641 DKKAN----GPDSKGPGLVFKITCKVPYKTVLKAHNALVLKAESVVDKNEW--------INKLQK 693

  Fly   646 ETQENGDESAS---EESSSDPQLERQV-------ETIRNL---VDSYMKIVTKTTRDMVPKAIMM 697
            ..|..|.:..|   .:|.|:..|::.|       |.:|.:   |..|::.|..:....||||:::
plant   694 VIQARGGQVGSVSMRQSLSEGSLDKMVRKPIDPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVL 758

  Fly   698 LIINNAKDFINGELLAHLYASGDQ--AQMMEESAESATRRE-------------EMLRMYRACKD 747
            ..:..||:.:..:|.:.:.|.|::  ..:::|......|||             ..|.::.....
plant   759 CQVEKAKEDMLNQLYSSISAIGNERIESLIQEDQNVKRRRERYQKQSSLLSKLTRQLSIHDNRAA 823

  Fly   748 ALQIIGDVSMATVSSPLPP--PVKNDWL-----------------PSGLDNPRLSPPSPGGVRGK 793
            |.....|.| .|.|||...  ...:||:                 .||..:.|.|.|:..|....
plant   824 AASSYSDNS-GTESSPRASGGSSGDDWMNAFNSAANGPSDSLSKYGSGGHSRRYSDPAQNGDAAS 887

  Fly   794 PGPPA-QSSLGGRNPPLPPSTG 814
            ||..: :.:...|.||.||.||
plant   888 PGSGSNRRTTPNRLPPAPPPTG 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 64/229 (28%)
CrfC 73..>498 CDD:223771 110/462 (24%)
Dynamin_M 212..498 CDD:279383 67/313 (21%)
PH_dynamin 512..644 CDD:269958 32/189 (17%)
PH 552..638 CDD:278594 20/107 (19%)
GED 664..755 CDD:128597 22/115 (19%)
DUF4527 <758..819 CDD:291689 21/77 (27%)
Drf_FH1 <761..>846 CDD:283903 20/74 (27%)
ADL6NP_172500.1 DLP_1 41..303 CDD:206738 74/282 (26%)
Dynamin_M <286..490 CDD:279383 51/226 (23%)
PH 577..696 CDD:214574 23/130 (18%)
PH 577..695 CDD:278594 23/129 (18%)
GED 737..810 CDD:295362 16/72 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11566
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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