DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and OPA1

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_570850.2 Gene:OPA1 / 4976 HGNCID:8140 Length:1015 Species:Homo sapiens


Alignment Length:795 Identity:172/795 - (21%)
Similarity:310/795 - (38%) Gaps:189/795 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLITIVNKLQDAFT--SLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSG-IVTRRPL 64
            |||.:.:::.|..:  ....:.|..||::.|||.|||||:||||........||||| ::||.|:
Human   318 SLIDMYSEVLDVLSDYDASYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSGEMMTRSPV 382

  Fly    65 ILQLINGVTEYGEFLHIKGKKFSS--FD--------EIRKEIEDETDRVTGSNKGISNIPINLRV 119
            .:.|..|..      |:...|.||  ||        .:|.|||....:.......:|...|:|.|
Human   383 KVTLSEGPH------HVALFKDSSREFDLTKEEDLAALRHEIELRMRKNVKEGCTVSPETISLNV 441

  Fly   120 YSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKL 184
            ..|.:..:.|:||||:..........|.::.|..:...:::....:||.:...:.|...|....|
Human   442 KGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDL 506

  Fly   185 AKEVDPQGVRTIGVITKLDLMDEGTDA----RDILENKLLPLRR-GYIGVV---NRSQKDIEGRK 241
            ..::||.|.|||.|:||:||.::...:    :.|:|.||.|::. ||..||   ..|.:.||..:
Human   507 VSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQQIIEGKLFPMKALGYFAVVTGKGNSSESIEAIR 571

  Fly   242 DIHQALAAERKFFLSHPSYRHMADRLGTPYLQ--RVLNQQLTNHIRDTLPGLRDKLQKQMLTLEK 304
            :.      |.:||.:       :..|.|..|:  :|..:.|:..:.|..    .|:.::  ::|:
Human   572 EY------EEEFFQN-------SKLLKTSMLKAHQVTTRNLSLAVSDCF----WKMVRE--SVEQ 617

  Fly   305 EVEEFKHFQPGDASIKTKAMLQMIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFE 369
            :.:.||         .|:..|:  .:.::::.|..|      ::.|||...|| |.|..|.:...
Human   618 QADSFK---------ATRFNLE--TEWKNNYPRLRE------LDRNELFEKAK-NEILDEVISLS 664

  Fly   370 IVKMACDEKELRREI-----SFAIRNIH----------------GIRVGLFTP--------DMAF 405
            .|.....|:.|::.:     :..|.||:                .|::..:|.        ::|:
Human   665 QVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDIKLKQWTDKQLPNKAVEVAW 729

  Fly   406 EAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTAKMSRYPRLREETERIITTH-VRQREHSCKE 469
            |.:.:.....:.||..|..|.:..:|...|:..:.|..::....|::.|:|..: :..|..|.|:
Human   730 ETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESIKRHKWNDFAEDSLRVIQHNALEDRSISDKQ 794

  Fly   470 QILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTRQLGNQVIRKGHMVIQNLGIMKDIKLG 534
            |....|.|....:....:|          :|||                   |:|:         
Human   795 QWDAAIYFMEEALQARLKD----------TENA-------------------IENM--------- 821

  Fly   535 RSGPLNVRFFSPSTGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKLRDIEQGFMSMSRRV 599
                     ..|.......||...|.|.....:.::|.||.       ||..:....::: |..:
Human   822 ---------VGPDWKKRWLYWKNRTQEQCVHNETKNELEKM-------LKCNEEHPAYLA-SDEI 869

  Fly   600 TFALFSPDGRNVYKDYKQLELSCETVEDV--ESWKASFL----------RAGVYPEKQETQENGD 652
            |....:.:.|.|       |:....::|.  :.::..||          |.|.|..::...:   
Human   870 TTVRKNLESRGV-------EVDPSLIKDTWHQVYRRHFLKTALNHCNLCRRGFYYYQRHFVD--- 924

  Fly   653 ESASEESSSDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFI-----NGELL 712
               ||...:|..|..:::.:       :.|...|.|..:....:..:..|.|:.:     :||..
Human   925 ---SELECNDVVLFWRIQRM-------LAITANTLRQQLTNTEVRRLEKNVKEVLEDFAEDGEKK 979

  Fly   713 AHLYASGDQAQMMEE 727
            ..| .:|.:.|:.|:
Human   980 IKL-LTGKRVQLAED 993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 79/257 (31%)
CrfC 73..>498 CDD:223771 102/474 (22%)
Dynamin_M 212..498 CDD:279383 64/321 (20%)
PH_dynamin 512..644 CDD:269958 23/143 (16%)
PH 552..638 CDD:278594 17/97 (18%)
GED 664..755 CDD:128597 12/69 (17%)
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
OPA1NP_570850.2 DLP_1 342..616 CDD:206738 84/298 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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