DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and fzo

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_732840.1 Gene:fzo / 42745 FlyBaseID:FBgn0011596 Length:718 Species:Drosophila melanogaster


Alignment Length:832 Identity:142/832 - (17%)
Similarity:272/832 - (32%) Gaps:292/832 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSLITIVNK---LQD--------AFTS----LGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKD 50
            :.:.:||:.:   |:|        ||:|    :...:..|..::|..|..|.|||:|:...:.:.
  Fly    46 LSNFLTILEETVLLKDRQMLEHLCAFSSRVEAIAKVLSRDRMKVAFFGRTSNGKSAVINALLHEK 110

  Fly    51 FLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVT----------- 104
            .||...|..|               ..|..::....:..:.::.|.|||...::           
  Fly   111 ILPSAMGHTT---------------SCFCQVQANGSNETEHVKVEQEDEHMELSALSQLASAHSP 160

  Fly   105 GSNKGISNIPINLRVYSPHVL--NLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLIL 167
            |:.|..:.:.:|:......:|  ::.|:|.||          ||:..|:...:..:.......||
  Fly   161 GALKPSTLLQVNMAKNRCSILDYDVVLMDTPG----------VDVTAQLDDCLDSYCMDADVFIL 215

  Fly   168 AVTPANT----------------------------DLANSDALKLAKEVDPQGV-RTIGVITKLD 203
            .:...:|                            |.|:|...::.::|..|.: |.:.::  :|
  Fly   216 VLNAESTVSRVERQFFKDVASKLSRPNLFILNNRWDKASSLEPEMEQKVKDQHMERCVNLL--VD 278

  Fly   204 LMDEGTDARDILEN-------KLLPLRRGYI-----GVVNRSQKDIEGRKDIHQALAAERKFFLS 256
            .:...:.|::..|.       :.|.:|.|.|     ....|.|:.:....|....||...     
  Fly   279 ELGVYSTAQEAWERIYHVSALEALHIRNGQITNPSGQTQQRYQEFLRFENDFSNCLAVSA----- 338

  Fly   257 HPSYRHMADRLGTPYL---QRVLNQQLTNHIRDTL--------PGLRDKLQKQMLTLEKEVEEFK 310
                  :..:.| |:|   |::|||     ::.||        ..|.|:.:::...|..|:|::.
  Fly   339 ------LKTKFG-PHLLSAQKILNQ-----LKSTLICPFIEKVSRLIDENKERRANLNAEIEDWL 391

  Fly   311 HFQPGDASIKTKAMLQMIQQLQSDFERTIEGS---GSALVN----TNELSGGAKINRIFHERLRF 368
            .....|.           :.||..||...|.:   |..::|    |...|.....::.||.....
  Fly   392 ILMQEDR-----------EALQYCFEELTEMTQRVGRCVLNDQIKTLIPSSVLSFSQPFHPEFPA 445

  Fly   369 EIVKMACDEKELRREISFAIRNIHGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSV 433
            :|.:.   ::.|...:.                            .||::.|::|:.:.:|    
  Fly   446 QIGQY---QRSLCAHLD----------------------------KLLEDRVLQCLSIPLQ---- 475

  Fly   434 VVRMCTAKMSRYPRLREETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDF-----IGFA 493
                         |...:.|:.|...:  .|:||..|::..:|.: :||:....|.     :||.
  Fly   476 -------------RKILDIEKEIGLPI--AENSCDWQLIYGLDCQ-SYMSDFQPDLRFRFSLGFT 524

  Fly   494 NAQNKSENANKTGTRQLGNQVIRKGHMVIQNLGIMKDIKLGRSGPLNVRFFSPSTGGSRPYWFVL 558
            ...::.|          ||..:......||.|         ::|........|...|:  :|.:|
  Fly   525 ALWHRLE----------GNLPLHASPFRIQKL---------QNGHKKCSPLPPLVNGN--HWQML 568

  Fly   559 TS------------------ESISWYKDEDEKEKKFMLPLDGLKLRDIEQGFMSMSRRVTFALFS 605
            .|                  .|.:|         ..:|.|.||                      
  Fly   569 ESLVKSKGSLGTVLLSAMAIRSFNW---------PIVLILGGL---------------------- 602

  Fly   606 PDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEKQETQENGDESASEESSSDPQLERQVE 670
                 |...|.....:..|.....|:|:.:.|......:.:.|:.       .|..:.||.:.:.
  Fly   603 -----VGSFYIYEYAAWTTAAQERSFKSQYARLLQQRLRSDVQQT-------VSGFELQLRQHLA 655

  Fly   671 TIRN---------LVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLA 713
            |:||         |.|..:: ..:.|:.:....::.|.:...:|  .|:|||
  Fly   656 TVRNCWEAQSNETLNDLNVR-TAELTKQIQSMEVLQLSLKKFRD--KGQLLA 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 53/307 (17%)
CrfC 73..>498 CDD:223771 83/501 (17%)
Dynamin_M 212..498 CDD:279383 56/320 (18%)
PH_dynamin 512..644 CDD:269958 22/149 (15%)
PH 552..638 CDD:278594 14/103 (14%)
GED 664..755 CDD:128597 14/59 (24%)
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
fzoNP_732840.1 DLP_2 87..334 CDD:206739 46/273 (17%)
Fzo_mitofusin 572..716 CDD:282633 28/179 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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