DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and dnm2b

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_998407.1 Gene:dnm2b / 406525 ZFINID:ZDB-GENE-040426-2371 Length:856 Species:Danio rerio


Alignment Length:861 Identity:578/861 - (67%)
Similarity:678/861 - (78%) Gaps:58/861 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLI 65
            |:.||.::|||||||:|:|....|:|||||||||||||||||||||||:||||||||||||||||
Zfish     6 MEDLIPLINKLQDAFSSIGQSCNLELPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLI 70

  Fly    66 LQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLI 130
            |||:|...||.||||.||:||..|||:|.|||.||||:||||||||.:|||||||||:|||||||
Zfish    71 LQLVNSKAEYAEFLHCKGRKFVDFDEVRMEIEAETDRITGSNKGISAVPINLRVYSPNVLNLTLI 135

  Fly   131 DLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRT 195
            ||||:||||:||||.|||.||:.|:.|||.||.||||||||||.|||||||||::||||.||:||
Zfish   136 DLPGMTKVAVGDQPQDIEYQIRDMLMQFISKENCLILAVTPANMDLANSDALKISKEVDAQGLRT 200

  Fly   196 IGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSY 260
            ||||||||||||||||||||||||||||||||||||||||||:|||||..|||||||||||||:|
Zfish   201 IGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIDGRKDIRAALAAERKFFLSHPAY 265

  Fly   261 RHMADRLGTPYLQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAML 325
            ||||:|:||||||:.||||||||||||||.||.|||.|:|:|||||||:|:|:|.|.:.||||:|
Zfish   266 RHMAERMGTPYLQKTLNQQLTNHIRDTLPALRSKLQSQLLSLEKEVEEYKNFKPDDPARKTKALL 330

  Fly   326 QMIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRN 390
            ||:||...|||:.|||||.. |:|.||||||:||||||||..||:|||..||||||||||:||:|
Zfish   331 QMVQQFGVDFEKRIEGSGDQ-VDTLELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKN 394

  Fly   391 IHGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTAKMSRYPRLREETERI 455
            |||:|.||||||:|||||||:||..||||.:|||||||.||:.::...|.|::.|||||||||||
Zfish   395 IHGVRTGLFTPDLAFEAIVKQQIVKLKEPCLKCVDLVVSELATLIHKGTEKLNSYPRLREETERI 459

  Fly   456 ITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTRQLGNQVIRKGHM 520
            :|||||:||...|||::||||.||:|:||||||||||||||.:|  |..|..|.:.|||||:|.:
Zfish   460 VTTHVRERESKTKEQVMLLIDIELSYINTNHEDFIGFANAQQRS--AAVTKKRAVPNQVIRRGWL 522

  Fly   521 VIQNLGIMKDIKLGRSGPLNVRFFSPSTGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL 585
            .| |:.|||                   |||:.||||||:||:||||||:|||||||||||.|||
Zfish   523 TI-NISIMK-------------------GGSKDYWFVLTAESLSWYKDEEEKEKKFMLPLDNLKL 567

  Fly   586 RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEKQETQEN 650
            ||:|:.|  ||.:.||.:|:.:.||||||.:|:||:|.|.|||:|||||||||||||||.:. ||
Zfish   568 RDVEKSF--MSNKHTFGIFNTEQRNVYKDLRQIELACATQEDVDSWKASFLRAGVYPEKDQV-EN 629

  Fly   651 GDESASEESSSDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAKDFINGELLAHL 715
            ||.|| :..|.||||||||||||||||||:.||.|:.||::||.||.|:||:||:||..||||:|
Zfish   630 GDVSA-DSLSMDPQLERQVETIRNLVDSYISIVNKSIRDLMPKTIMHLMINSAKEFIYSELLAYL 693

  Fly   716 YASGDQAQMMEESAESATRREEMLRMYRACKDALQIIGDVSMATVSSPLPPPVKNDWL------- 773
            |:||||..:||||||...||:||||||.|.|:||:||||:|.:|:::|:|.||.:.|:       
Zfish   694 YSSGDQNSLMEESAEQEQRRDEMLRMYNALKEALKIIGDISTSTITTPVPAPVDDTWIHTDPSPP 758

  Fly   774 ----PSGLDNPRLSPPS-PGGVRG-KPGPPAQSSLGGRNPPLPPSTGRPAPAIPNRPGGGAPPLP 832
                |||...|   ||. |..||| .||.|||       |||.||....||.:|:||....|.: 
Zfish   759 SQRKPSGGSAP---PPGRPPAVRGPTPGAPAQ-------PPLNPSPAFGAPPVPSRPTTLEPAV- 812

  Fly   833 GGRPGGSLPPPMLPSR 848
                   .|||.:|||
Zfish   813 -------APPPQVPSR 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 193/238 (81%)
CrfC 73..>498 CDD:223771 326/424 (77%)
Dynamin_M 212..498 CDD:279383 215/285 (75%)
PH_dynamin 512..644 CDD:269958 78/131 (60%)
PH 552..638 CDD:278594 58/85 (68%)
GED 664..755 CDD:128597 63/90 (70%)
DUF4527 <758..819 CDD:291689 27/73 (37%)
Drf_FH1 <761..>846 CDD:283903 34/97 (35%)
dnm2bNP_998407.1 DYNc 6..245 CDD:197491 193/238 (81%)
CrfC 79..732 CDD:223771 481/679 (71%)
Dynamin_M 217..502 CDD:279383 215/285 (75%)
PH_dynamin 514..624 CDD:269958 78/131 (60%)
GED 645..733 CDD:280391 60/87 (69%)
WWbp <745..800 CDD:304964 24/64 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 438 1.000 Domainoid score I538
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141880at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100232
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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