DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and Mx1

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_034976.1 Gene:Mx1 / 17857 MGIID:97243 Length:631 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491
CrfC 73..>498 CDD:223771
Dynamin_M 212..498 CDD:279383
PH_dynamin 512..644 CDD:269958
PH 552..638 CDD:278594
GED 664..755 CDD:128597
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
Mx1NP_034976.1 DLP_1 34..306 CDD:206738
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 43..50
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 68..70
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 144..147
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 213..216
Dynamin_M 227..512 CDD:279383
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 245..248
Bundle signaling element (BSE). /evidence=ECO:0000250 307..332
Middle domain. /evidence=ECO:0000250 332..499
Stalk. /evidence=ECO:0000250 333..601
Critical for lipid-binding. /evidence=ECO:0000250 520..522
GED 538..629 CDD:128597
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.