DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and DNM1

DIOPT Version :10

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_001361198.1 Gene:DNM1 / 1759 HGNCID:2972 Length:867 Species:Homo sapiens


Alignment Length:883 Identity:586/883 - (66%)
Similarity:693/883 - (78%) Gaps:74/883 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLI 65
            |:.||.:||:|||||:::|.:..|||||||||||||||||||||||||:|||||||||||||||:
Human     6 MEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLV 70

  Fly    66 LQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLI 130
            |||:|..|||.||||.|||||:.|:|:|.|||.|||||||:|||||.:||||||||||||||||:
Human    71 LQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLV 135

  Fly   131 DLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRT 195
            ||||:|||.:||||.|||.||:.|:.||:.||.||||||:|||:|||||||||:||||||||.||
Human   136 DLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRT 200

  Fly   196 IGVITKLDLMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSY 260
            ||||||||||||||||||:|||||||||||||||||||||||:|:|||..|||||||||||||||
Human   201 IGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHPSY 265

  Fly   261 RHMADRLGTPYLQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAML 325
            ||:|||:||||||:||||||||||||||||||:|||.|:|::||||||:|:|:|.|.:.||||:|
Human   266 RHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVEEYKNFRPDDPARKTKALL 330

  Fly   326 QMIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRN 390
            ||:||...|||:.|||||.. ::|.||||||:||||||||..||:|||..||||||||||:||:|
Human   331 QMVQQFAVDFEKRIEGSGDQ-IDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISYAIKN 394

  Fly   391 IHGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTAKMSRYPRLREETERI 455
            |||||.||||||||||.|||:|:..::||.:||||:|:.||...||.||.|:.:|||||||.|||
Human   395 IHGIRTGLFTPDMAFETIVKKQVKKIREPCLKCVDMVISELISTVRQCTKKLQQYPRLREEMERI 459

  Fly   456 ITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTRQLGNQ----VIR 516
            :|||:|:||...|||::||||.|||||||||||||||||||.:|...||..|.  |||    |||
Human   460 VTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFIGFANAQQRSNQMNKKKTS--GNQDEILVIR 522

  Fly   517 KGHMVIQNLGIMKDIKLGRSGPLNVRFFSPSTGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLD 581
            ||.:.|.|:||||                   |||:.||||||:|::|||||::|||||:||.:|
Human   523 KGWLTINNIGIMK-------------------GGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVD 568

  Fly   582 GLKLRDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEK-- 644
            .|||||:|:|||| |:.: ||||:.:.|||||||:||||:|||.|:|:||||||||||||||:  
Human   569 NLKLRDVEKGFMS-SKHI-FALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAGVYPERVG 631

  Fly   645 -----QETQENGDESASEESSSDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIINNAK 704
                 .||:|||.:|...  |.|||||||||||||||||||.||.||.||::||.||.|:|||.|
Human   632 DKEKASETEENGSDSFMH--SMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTK 694

  Fly   705 DFINGELLAHLYASGDQAQMMEESAESATRREEMLRMYRACKDALQIIGDVSMATVSSPLPPPVK 769
            :||..||||:||:.|||..:||||||.|.||:||||||.|.|:||.||||::..|||:|:||||.
Human   695 EFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVD 759

  Fly   770 NDWL-----PSGLDNPRLS----------PPSPGGVRG-KPG-PPAQSSLGGRNPPLPPSTGRPA 817
            :.||     |:|..:|..|          ||:..|.|| .|| |||.|:|||            |
Human   760 DSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGG------------A 812

  Fly   818 PAIPNRPGGGAPPLPGGRPGGSLPPPMLPSRVSGAVGG 855
            |.:|:||  ||.|.|.|      |||.:|||.:.|..|
Human   813 PPVPSRP--GASPDPFG------PPPQVPSRPNRAPPG 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 191/238 (80%)
Dynamin_M 210..498 CDD:460033 215/287 (75%)
PH_dynamin 512..644 CDD:269958 80/135 (59%)
GED 664..755 CDD:128597 65/90 (72%)
FAP 725..>855 CDD:429334 68/146 (47%)
DNM1NP_001361198.1 DYNc 6..245 CDD:197491 191/238 (80%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 38..45 6/6 (100%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 64..66 1/1 (100%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 136..139 2/2 (100%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 205..208 2/2 (100%)
Dynamin_M 215..502 CDD:460033 215/287 (75%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01055 235..238 2/2 (100%)
PH_dynamin 520..629 CDD:269958 78/129 (60%)
GED 655..745 CDD:460495 64/89 (72%)
PHA03247 <747..852 CDD:223021 46/116 (40%)

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