DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and fzo-1

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_495161.1 Gene:fzo-1 / 173990 WormBaseID:WBGene00001509 Length:774 Species:Caenorhabditis elegans


Alignment Length:615 Identity:120/615 - (19%)
Similarity:207/615 - (33%) Gaps:231/615 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLIL 66
            ||:.||:    |.|       |.|..::...|..|.|||:.:...:.:..||:|.|..|  ...|
 Worm    87 DSIKTIM----DTF-------QRDNMKVVFFGRTSNGKSTTINAMLHEKVLPQGMGHTT--CCFL 138

  Fly    67 QLINGVTEYGEF----------LHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPIN----- 116
            |:.....|.|..          :.:.||       |...:.||.          |::|..     
 Worm   139 QVEGSEGEVGHLQLDDNPQKIDMKMLGK-------IGHALSDEN----------SDLPAMGQDSL 186

  Fly   117 LRVYSP--------HVL--NLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCL----IL 167
            |:|:.|        .:|  ::.::|.||          ||:..:....|     .:.||    .:
 Worm   187 LKVFHPKKSESGECRLLQNDVVILDSPG----------VDLSPEFDSWI-----DKHCLDADVFV 236

  Fly   168 AVTPANTDLANSDA---LKLAKEVDPQGVRTIG---------------------------VITKL 202
            .|:.|.:.|..::.   |::||::....|..:.                           ::.:|
 Worm   237 LVSNAESTLTQAEKNFFLRVAKKLSKPNVFILNNRWDASAAETENIEDVKKQHLTRFRQFLVDEL 301

  Fly   203 DLMDEG--------TDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPS 259
            ::..|.        ..:|::||::|...     |:|.::.: .||    |...|.|.:.|..|  
 Worm   302 EVCSEREVNDRIFFVSSREVLESRLKAR-----GLVQKAYQ-AEG----HGTRALEFQNFERH-- 354

  Fly   260 YRHMADR--LGTPY-------------LQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEE- 308
            :.|...|  :.|.:             ::..||..||:....     |.|||..:....:...| 
 Worm   355 FEHCISRSAIHTKFEAHNRRAHEMIGKMRLNLNSVLTSAAEQ-----RSKLQNNLNESTRTFNEC 414

  Fly   309 ---FKHFQPGDASIKTKAMLQMIQQLQSD----------------------FERTIEGSGSALVN 348
               |..|:        ||..:..:||:::                      ||:..:||.|.:..
 Worm   415 RVNFTQFE--------KAYREQTEQLRAEVHLKVSADFFEEIARLDAIIDRFEQPFDGSSSGMTK 471

  Fly   349 TNE---------LSG-------GAKINRIFH-ERLRFEIVKMACDEK---------ELRREISFA 387
            ..|         ||.       |..::||:: |...|:.|.....|.         ..|....|:
 Worm   472 YKEDLAIFVDKCLSSDLEARCTGGLMSRIWNLENDMFQYVTKILAEPYQNKLEEVWRYRAPFKFS 536

  Fly   388 IRNIHGIRVGLFTPDMAF------EAIVKRQIALLK-EPVIKCVDLVVQELSVVVRMCTAKMSRY 445
            |.......|..|..|:.|      .||::|.||... :||......::..||             
 Worm   537 ICVDVPALVNDFHEDLEFRFTFGLHAIIRRIIAYRSGQPVTAINTNLLTPLS------------- 588

  Fly   446 PRLREETERIITTHVRQREHSC--KEQILL 473
              |::::|:   ..||..|.|.  :||.::
 Worm   589 --LKQQSEK---NSVRDAEASAASEEQAMM 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 57/304 (19%)
CrfC 73..>498 CDD:223771 100/544 (18%)
Dynamin_M 212..498 CDD:279383 70/338 (21%)
PH_dynamin 512..644 CDD:269958
PH 552..638 CDD:278594
GED 664..755 CDD:128597
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
fzo-1NP_495161.1 DLP_2 101..359 CDD:206739 56/303 (18%)
Fzo_mitofusin 609..767 CDD:282633 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0699
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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