DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment shi and fzo-1

DIOPT Version :10

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:NP_495161.1 Gene:fzo-1 / 173990 WormBaseID:WBGene00001509 Length:774 Species:Caenorhabditis elegans


Alignment Length:615 Identity:120/615 - (19%)
Similarity:207/615 - (33%) Gaps:231/615 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRGSGIVTRRPLIL 66
            ||:.||:    |.|       |.|..::...|..|.|||:.:...:.:..||:|.|..|  ...|
 Worm    87 DSIKTIM----DTF-------QRDNMKVVFFGRTSNGKSTTINAMLHEKVLPQGMGHTT--CCFL 138

  Fly    67 QLINGVTEYGEF----------LHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPIN----- 116
            |:.....|.|..          :.:.||       |...:.||.          |::|..     
 Worm   139 QVEGSEGEVGHLQLDDNPQKIDMKMLGK-------IGHALSDEN----------SDLPAMGQDSL 186

  Fly   117 LRVYSP--------HVL--NLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCL----IL 167
            |:|:.|        .:|  ::.::|.||          ||:..:....|     .:.||    .:
 Worm   187 LKVFHPKKSESGECRLLQNDVVILDSPG----------VDLSPEFDSWI-----DKHCLDADVFV 236

  Fly   168 AVTPANTDLANSDA---LKLAKEVDPQGVRTIG---------------------------VITKL 202
            .|:.|.:.|..::.   |::||::....|..:.                           ::.:|
 Worm   237 LVSNAESTLTQAEKNFFLRVAKKLSKPNVFILNNRWDASAAETENIEDVKKQHLTRFRQFLVDEL 301

  Fly   203 DLMDEG--------TDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPS 259
            ::..|.        ..:|::||::|...     |:|.::.: .||    |...|.|.:.|..|  
 Worm   302 EVCSEREVNDRIFFVSSREVLESRLKAR-----GLVQKAYQ-AEG----HGTRALEFQNFERH-- 354

  Fly   260 YRHMADR--LGTPY-------------LQRVLNQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEE- 308
            :.|...|  :.|.:             ::..||..||:....     |.|||..:....:...| 
 Worm   355 FEHCISRSAIHTKFEAHNRRAHEMIGKMRLNLNSVLTSAAEQ-----RSKLQNNLNESTRTFNEC 414

  Fly   309 ---FKHFQPGDASIKTKAMLQMIQQLQSD----------------------FERTIEGSGSALVN 348
               |..|:        ||..:..:||:::                      ||:..:||.|.:..
 Worm   415 RVNFTQFE--------KAYREQTEQLRAEVHLKVSADFFEEIARLDAIIDRFEQPFDGSSSGMTK 471

  Fly   349 TNE---------LSG-------GAKINRIFH-ERLRFEIVKMACDEK---------ELRREISFA 387
            ..|         ||.       |..::||:: |...|:.|.....|.         ..|....|:
 Worm   472 YKEDLAIFVDKCLSSDLEARCTGGLMSRIWNLENDMFQYVTKILAEPYQNKLEEVWRYRAPFKFS 536

  Fly   388 IRNIHGIRVGLFTPDMAF------EAIVKRQIALLK-EPVIKCVDLVVQELSVVVRMCTAKMSRY 445
            |.......|..|..|:.|      .||::|.||... :||......::..||             
 Worm   537 ICVDVPALVNDFHEDLEFRFTFGLHAIIRRIIAYRSGQPVTAINTNLLTPLS------------- 588

  Fly   446 PRLREETERIITTHVRQREHSC--KEQILL 473
              |::::|:   ..||..|.|.  :||.::
 Worm   589 --LKQQSEK---NSVRDAEASAASEEQAMM 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 57/304 (19%)
Dynamin_M 210..498 CDD:460033 70/340 (21%)
PH_dynamin 512..644 CDD:269958
GED 664..755 CDD:128597
FAP 725..>855 CDD:429334
fzo-1NP_495161.1 P-loop containing Nucleoside Triphosphate Hydrolases <70..>123 CDD:476819 13/46 (28%)
DLP_2 101..359 CDD:206739 56/303 (18%)
Fzo_mitofusin 609..767 CDD:461432 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.