DRSC/TRiP Functional Genomics Resources

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Protein Alignment shi and dnm1l

DIOPT Version :9

Sequence 1:NP_001259588.1 Gene:shi / 45928 FlyBaseID:FBgn0003392 Length:896 Species:Drosophila melanogaster
Sequence 2:XP_031753959.1 Gene:dnm1l / 100494576 XenbaseID:XB-GENE-487279 Length:822 Species:Xenopus tropicalis


Alignment Length:724 Identity:247/724 - (34%)
Similarity:373/724 - (51%) Gaps:138/724 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 EYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKV 138
            |:|:|||.|.|.::.|||||:|||:||:|::|:|||||:.||:|:::||:|:||||:||||:|||
 Frog   189 EWGKFLHTKNKIYTDFDEIRQEIENETERISGNNKGISSEPIHLKIFSPNVVNLTLVDLPGMTKV 253

  Fly   139 AIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLD 203
            .:||||.|||.||:::|.::|.....:|||||.||||:|.|:|||:|:|.||.|.||:.||||||
 Frog   254 PVGDQPKDIEIQIRELILRYISNPNSIILAVTAANTDMATSEALKIARESDPDGRRTLAVITKLD 318

  Fly   204 LMDEGTDARDILENKLLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLG 268
            |||.||||.|:|..:::|::.|.||||||||.||..:|.:..::..|..|.  ...|..:|:|.|
 Frog   319 LMDAGTDAMDVLLGRVIPVKLGIIGVVNRSQLDINNKKSVADSIRDEYGFL--QKKYPSLANRNG 381

  Fly   269 TPYLQRVLNQQLTNHIRDTLPGLRDKL-------QKQMLTLEKEVEEFKHFQPGDASIKTKAMLQ 326
            |.||.|.||:.|.:||||.||.|:.::       |..:.:..:.||:           |:..:||
 Frog   382 TKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVED-----------KSATLLQ 435

  Fly   327 MIQQLQSDFERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNI 391
            :|.:..:::..||||: :..:.|:||.|||:|..||||.....:..:.........:|..||||.
 Frog   436 LITKFATEYCNTIEGT-AKYIETSELCGGARICYIFHETFGRTLESVDPLGGLTTIDILTAIRNA 499

  Fly   392 HGIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMC----TAKMSRYPRLREET 452
            .|.|..||.|:::||.:||||:..|:||.::||:||.:|:..:::.|    |.::.|:|:|.:..
 Frog   500 TGPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAI 564

  Fly   453 ERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDF---IGFANAQNKSENANKTGTRQLGNQV 514
            ..::|:.:|:|.....|.:..|:..||||:||.|.||   .|..|...:.:..|:          
 Frog   565 VEVVTSLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNN
NIEEQRRNR---------- 619

  Fly   515 IRKGHMVIQNLGIMKDIKLGRSGPLNVRFFSPSTGGSRPYWFVLTSESISWYKDEDEKEKKFMLP 579
                  :.:.|...::.....||||......||...|.              .:.|.|.......
 Frog   620 ------IARELPPPREKPPKASGPLPAASLEPSPASSS--------------AETDGKAAPAGNT 664

  Fly   580 LDGLKLRDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPEK 644
            .|||                      ||.                  ...:|:      |:...|
 Frog   665 GDGL----------------------PDA------------------GTGNWR------GMLKPK 683

  Fly   645 QETQENGDESASEESSSDP----------------------------QLERQVETIRNLVDSYMK 681
                  |:|..:||.:..|                            :.:|..|.|..|:.||..
 Frog   684 ------GEELPAEEKNRAPPALPASPLRGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFL 742

  Fly   682 IVTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYASGDQAQMMEESAESATRREEMLRMYRACK 746
            ||.|..:|.||||:|..::|:.||.:..||:..||.|.....::.||.:.|.||:|...|.:|.:
 Frog   743 IVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSMLLEDLLTESEDMAQRRKEAADMLKALQ 807

  Fly   747 DALQIIGDV 755
            .|.|||.::
 Frog   808 RASQIIAEI 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shiNP_001259588.1 DYNc 1..240 CDD:197491 100/165 (61%)
CrfC 73..>498 CDD:223771 188/437 (43%)
Dynamin_M 212..498 CDD:279383 102/299 (34%)
PH_dynamin 512..644 CDD:269958 17/131 (13%)
PH 552..638 CDD:278594 8/85 (9%)
GED 664..755 CDD:128597 35/90 (39%)
DUF4527 <758..819 CDD:291689
Drf_FH1 <761..>846 CDD:283903
dnm1lXP_031753959.1 DLP_1 179..402 CDD:206738 118/214 (55%)
Dynamin_M 326..610 CDD:395818 102/297 (34%)
GED 728..816 CDD:396682 35/87 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D141880at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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