DRSC/TRiP Functional Genomics Resources

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Protein Alignment fzr and CDH1

DIOPT Version :9

Sequence 1:NP_524852.2 Gene:fzr / 45922 FlyBaseID:FBgn0262699 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_011512.1 Gene:CDH1 / 852881 SGDID:S000002971 Length:566 Species:Saccharomyces cerevisiae


Alignment Length:553 Identity:212/553 - (38%)
Similarity:302/553 - (54%) Gaps:92/553 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KRILKH--YSPVARNLFNNFESSTTPTSL--DRFIPCRAYNNWQ-----TNFASINKSNDNSPQT 63
            ||:.|.  .|..:.:|.::....:.|:::  ||:||.|...::.     ::.||:...|.:|.:.
Yeast    24 KRVSKRPISSSSSASLLSSPSRRSRPSTVYGDRYIPSRTDIDFNSIVSISSMASVPALNPSSTED 88

  Fly    64 S---KKQRDCGETARDSLAYSCLLKNELLG-----------SAIDDVK-----TAGEERNENA-- 107
            .   :|:|...||      |:.||||||.|           |:||.:|     |.|....||.  
Yeast    89 QVEYQKERQAHET------YNTLLKNELFGEMLSKDTVGSESSIDRIKNTRPSTRGNVHAENTTR 147

  Fly   108 ------------------------YTPAAKRSLFKYQS-----PTKQDYNGE--CPY-------- 133
                                    .||...|.||..|.     |:.....|.  ..|        
Yeast   148 HGYELERVSTPPPEAAGLEEFSPHSTPVTPRRLFTSQQDEITRPSSNSVRGASLLTYQQRKGRRL 212

  Fly   134 ------------SLSPVSAKSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVL 186
                        |:|||...|::||.||.|..|:|:::|::|||||.|.||||.:|:||||.:||
Yeast   213 SAASLLQSQFFDSMSPVRPDSKQLLLSPGKQFRQIAKVPYRVLDAPSLADDFYYSLIDWSSTDVL 277

  Fly   187 AVGLGSCVYLWSACTSQVTRLCDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINK 251
            ||.||..::|....|..|..|||..   |..||:||...|:.:|||..:|.|.::||...|.|..
Yeast   278 AVALGKSIFLTDNNTGDVVHLCDTE---NEYTSLSWIGAGSHLAVGQANGLVEIYDVMKRKCIRT 339

  Fly   252 LNGHSARVGALAWNSDILSSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLASG 316
            |:||..||..|:||:.:|:|||||..|:.||.|.|....| .:..|.||||||||:..:..||||
Yeast   340 LSGHIDRVACLSWNNHVLTSGSRDHRILHRDVRMPDPFFE-TIESHTQEVCGLKWNVADNKLASG 403

  Fly   317 GNDNRLYVWNQHSVNPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCV 381
            ||||.::|:...|.:|:.::.||.|||||:|||||..|:||:|||||||.::.||..|...|..:
Yeast   404 GNDNVVHVYEGTSKSPILTFDEHKAAVKAMAWSPHKRGVLATGGGTADRRLKIWNVNTSIKMSDI 468

  Fly   382 DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 446
            |:|||:||:.|||:::|||::||||:..:.:|...|:..:|.|.|||:|||:|.||.||..:|:|
Yeast   469 DSGSQICNMVWSKNTNELVTSHGYSKYNLTLWDCNSMDPIAILKGHSFRVLHLTLSNDGTTVVSG 533

  Fly   447 AGDETLRFWNVFSKARSQ-KENKSVLNLFANIR 478
            |||||||:|.:|.|.::: :.|..:.:.|..||
Yeast   534 AGDETLRYWKLFDKPKAKVQPNSLIFDAFNQIR 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzrNP_524852.2 WD40 <174..469 CDD:225201 143/295 (48%)
WD40 178..456 CDD:238121 137/277 (49%)
WD40 repeat 217..254 CDD:293791 15/36 (42%)
WD40 repeat 260..296 CDD:293791 15/35 (43%)
WD40 repeat 301..337 CDD:293791 17/35 (49%)
WD40 repeat 344..382 CDD:293791 21/37 (57%)
WD40 repeat 387..425 CDD:293791 15/37 (41%)
WD40 repeat 431..457 CDD:293791 17/25 (68%)
CDH1NP_011512.1 WD40 269..543 CDD:421866 137/277 (49%)
WD40 repeat 269..300 CDD:293791 14/30 (47%)
WD40 repeat 305..342 CDD:293791 15/36 (42%)
WD40 repeat 348..383 CDD:293791 15/35 (43%)
WD40 repeat 388..424 CDD:293791 17/35 (49%)
WD40 repeat 431..467 CDD:293791 21/35 (60%)
WD40 repeat 474..512 CDD:293791 15/37 (41%)
WD40 repeat 518..544 CDD:293791 17/25 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346542
Domainoid 1 1.000 66 1.000 Domainoid score I2375
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9444
Inparanoid 1 1.050 341 1.000 Inparanoid score I410
Isobase 1 0.950 - 0 Normalized mean entropy S771
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000628
OrthoInspector 1 1.000 - - otm46557
orthoMCL 1 0.900 - - OOG6_101383
Panther 1 1.100 - - LDO PTHR19918
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R711
SonicParanoid 1 1.000 - - X1507
TreeFam 1 0.960 - -
1514.730

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