DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fzr and CDC20.4

DIOPT Version :10

Sequence 1:NP_524852.2 Gene:fzr / 45922 FlyBaseID:FBgn0262699 Length:478 Species:Drosophila melanogaster
Sequence 2:NP_198042.1 Gene:CDC20.4 / 832748 AraportID:AT5G26900 Length:444 Species:Arabidopsis thaliana


Alignment Length:477 Identity:180/477 - (37%)
Similarity:260/477 - (54%) Gaps:60/477 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KHYSPVARNLFNNFESSTTPTSLDRFIPCRAYNNWQ-TNFASINKSNDNSPQTSKKQRDCGETAR 75
            :|:.|  |.|        :..:||||||.|:..::. .|:|....|..|..:.:...|.      
plant    13 EHFLP--RKL--------SKQNLDRFIPNRSAKDFDFANYALTQGSKRNLDEVTSASRK------ 61

  Fly    76 DSLAYSCLLKNELLGSAIDDVKTAGEERNENAYTPAAKRSLFKYQSPTKQDYNGECPYSLSPVSA 140
               ||...|...:               |:|.....|.|:..|....|.   :.:.|:. :|   
plant    62 ---AYMTQLAVVM---------------NQNRTRILAFRNKPKSLLSTN---HSDSPHQ-NP--- 101

  Fly   141 KSQKLLRSPRKATRKISRIPFKVLDAPELQDDFYLNLVDWSSQNVLAVGLGSCVYLWSACTSQVT 205
                   .|.|..|.|.:...:|||||.|:|||.|||:||.|.||||:.||..||||.|.:...:
plant   102 -------KPVKPRRYIPQNSERVLDAPGLRDDFSLNLLDWGSANVLAIALGDTVYLWDASSGSTS 159

  Fly   206 RLCDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINKL-NGHSARVGALAWNSDIL 269
            .|..:..|...|||::|.:.|..:|||..:..|.:||..:|:|:..| .||.:|||:|||::.||
plant   160 ELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNHIL 224

  Fly   270 SSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLASGGNDNRLYVWNQHSVNPVQ 334
            ::|..|..|:..|.|......|..| ||.:||||||||......|||||||.:::|::...:..|
plant   225 TTGGMDGKIVNNDVRIRSSIVETYL-GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQ 288

  Fly   335 S------YTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWS 393
            :      :.||.|||:|:||.|....|||:|||..|..|:||||.||..:..|:||||||:|.||
plant   289 TRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWS 353

  Fly   394 KHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFWNVF 458
            :...||:|:||::|||:.:|||||::::|:|.||:.|||::|.||:|..:.:.||||.||.||||
plant   354 QSERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF 418

  Fly   459 S---KARSQKENKSVLNLFANI 477
            .   |...:..:|....||:::
plant   419 GEPPKTTKKAASKKYPELFSHV 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fzrNP_524852.2 WD40 <194..457 CDD:441893 121/269 (45%)
WD40 repeat 217..254 CDD:293791 14/37 (38%)
WD40 repeat 260..296 CDD:293791 13/35 (37%)
WD40 repeat 301..337 CDD:293791 16/41 (39%)
WD40 repeat 344..382 CDD:293791 18/37 (49%)
WD40 repeat 387..425 CDD:293791 19/37 (51%)
WD40 repeat 431..457 CDD:293791 13/25 (52%)
CDC20.4NP_198042.1 WD40 <140..417 CDD:441893 125/277 (45%)
WD40 repeat 172..209 CDD:293791 13/36 (36%)
WD40 repeat 214..246 CDD:293791 12/31 (39%)
WD40 repeat 256..296 CDD:293791 15/39 (38%)
WD40 repeat 303..339 CDD:293791 19/35 (54%)
WD40 repeat 347..385 CDD:293791 19/37 (51%)
WD40 repeat 391..415 CDD:293791 12/23 (52%)

Return to query results.
Submit another query.