Sequence 1: | NP_524406.1 | Gene: | ort / 45910 | FlyBaseID: | FBgn0003011 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_065234.1 | Gene: | Gabrq / 57249 | MGIID: | 1888498 | Length: | 638 | Species: | Mus musculus |
Alignment Length: | 635 | Identity: | 148/635 - (23%) |
---|---|---|---|
Similarity: | 234/635 - (36%) | Gaps: | 195/635 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 IIILVICTICMKHYAKGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDE 69
Fly 70 NSMTYVADVFFAQTWKDHRLRLPE---NMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIP 131
Fly 132 NHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVD 196
Fly 197 ENIELPQVALIRNETADCTQVY-STGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWI 260
Fly 261 KPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIV-- 323
Fly 324 ----------------------------------------------------------------- 323
Fly 324 ----------------------------------LSDTP------IPK---------------PM 333
Fly 334 AYPPKPVAGDGPKKE-----GEGAPPGGSNSTASKQQATM--LPLADEKIEKIEKI--------- 382
Fly 383 ---FDEMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEP------ 438
Fly 439 ----ELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEY 484 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ort | NP_524406.1 | LIC | 31..481 | CDD:273305 | 143/604 (24%) |
Neur_chan_LBD | 38..235 | CDD:280998 | 61/200 (31%) | ||
Neur_chan_memb | 243..>334 | CDD:280999 | 41/212 (19%) | ||
Gabrq | NP_065234.1 | LGIC_ECD_GABAAR_theta | 82..263 | CDD:349804 | 57/186 (31%) |
Cys-loop | 183..197 | CDD:349804 | 4/13 (31%) | ||
LGIC_TM_GABAAR_theta | 266..365 | CDD:349858 | 36/98 (37%) | ||
TM1 helix | 266..289 | CDD:349858 | 10/22 (45%) | ||
TM2 helix | 293..317 | CDD:349858 | 10/23 (43%) | ||
TM3 helix | 325..351 | CDD:349858 | 13/25 (52%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 491..515 | 6/23 (26%) | |||
LGIC_TM | <604..636 | CDD:365787 | 15/41 (37%) | ||
TM4 helix | 612..633 | CDD:349850 | 9/29 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |