Protein Alignment ort and gabrr3a

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001122232.1
• Gene: gabrr3a / 570876
• ZFINID: ZDB-GENE-080722-20
• Length: 472
• Species: Danio rerio
• Alignment Length: 472
• Identity: 133/472 - (28%)
• Similarity: 216/472 - (45%)
• Gaps: 66/472 - (13%)

  Fly    20 KGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTW 84
            |.:..:||.|.......|:.:|....|...|....|...|.|..:|.|.|.:|.:...::....|
Zfish    56 KSDSTKSLLIKSEQLLRIEDHDFAMRPGFGGSAIPVGIDVQVESIDGISEVNMDFTMTLYLRHYW 120

  Fly    85 KDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKL 149
            :|.||..|.: ..:.|..:...:|.:|.||.||.::|.......|:.|..:.::.|..|||.|::
Zfish   121 QDDRLAFPSS-NNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRI 184

  Fly   150 TLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIRNETADC 214
            |:...|.|:|:.:|.|||.|.|::||.::..:||:..|......:..:.|.|.|..:.....:..
Zfish   185 TVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIALSQFFIEEFHPSYG 249

  Fly   215 TQVY-STGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLT 278
            ...| |||.:..|.:.|.|:|.:.:::..||.||.::|::|||||||...|.||||:||:|::||
Zfish   250 LAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLT 314

  Fly   279 LSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPK------PMAY-P 336
            :||......:|:|.|||:||||.::....:|||::::||..:|...:...:.|      |.:| .
Zfish   315 MSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKLQKGKLPASYDA 379

  Fly   337 PKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVR 401
            .:.:|.||...:...|.|                            |.|:...   .:|||.
Zfish   380 TQAMAYDGCFHDDIDASP----------------------------FPELPTT---PSTTRT--- 410

  Fly   402 PPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQER--LKRAIYIDRSSRV 464
                     ||.:.|        :..|||.:..    .|.:.:......|  :..:..||..||:
Zfish   411 ---------IPARAS--------STEPPPTEGT----RLWRKRSVGKNIRFIMSNSYMIDSYSRI 454

  Fly   465 LFPALFASLNGIYWCVF 481
            |||..:...|.||||::
Zfish   455 LFPLAYLLFNIIYWCIY 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	129/459 (28%)
		Neur_chan_LBD	38..235	CDD:280998	55/197 (28%)
		Neur_chan_memb	243..>334	CDD:280999	41/96 (43%)
gabrr3a	NP_001122232.1	LIC	67..471	CDD:273305	129/459 (28%)
		LGIC_ECD	88..272	CDD:355788	53/184 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810