Protein Alignment ort and gabrr3a

DIOPT Version :10

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_001122232.1
• Gene: gabrr3a / 570876
• ZFINID: ZDB-GENE-080722-20
• Length: 472
• Species: Danio rerio
• Alignment Length: 472
• Identity: 133/472 - (28%)
• Similarity: 216/472 - (45%)
• Gaps: 66/472 - (13%)

  Fly    20 KGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTW 84
            |.:..:||.|.......|:.:|....|...|....|...|.|..:|.|.|.:|.:...::....|
Zfish    56 KSDSTKSLLIKSEQLLRIEDHDFAMRPGFGGSAIPVGIDVQVESIDGISEVNMDFTMTLYLRHYW 120

  Fly    85 KDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKL 149
            :|.||..|.: ..:.|..:...:|.:|.||.||.::|.......|:.|..:.::.|..|||.|::
Zfish   121 QDDRLAFPSS-NNKSRTFDARLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRI 184

  Fly   150 TLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIRNETADC 214
            |:...|.|:|:.:|.|||.|.|::||.::..:||:..|......:..:.|.|.|..:.....:..
Zfish   185 TVTALCSMDFSRFPLDTQNCSLELESYAYNENDLMLYWKNGNDSLRTDEIALSQFFIEEFHPSYG 249

  Fly   215 TQVY-STGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLT 278
            ...| |||.:..|.:.|.|:|.:.:::..||.||.::|::|||||||...|.||||:||:|::||
Zfish   250 LAFYSSTGWYNRLYINFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLT 314

  Fly   279 LSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPK------PMAY-P 336
            :||......:|:|.|||:||||.::....:|||::::||..:|...:...:.|      |.:| .
Zfish   315 MSTIITGVSASMPQVSYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKLQKGKLPASYDA 379

  Fly   337 PKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVR 401
            .:.:|.||...:...|.|                            |.|:...   .:|||.
Zfish   380 TQAMAYDGCFHDDIDASP----------------------------FPELPTT---PSTTRT--- 410

  Fly   402 PPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQER--LKRAIYIDRSSRV 464
                     ||.:.|        :..|||.:..    .|.:.:......|  :..:..||..||:
Zfish   411 ---------IPARAS--------STEPPPTEGT----RLWRKRSVGKNIRFIMSNSYMIDSYSRI 454

  Fly   465 LFPALFASLNGIYWCVF 481
            |||..:...|.||||::
Zfish   455 LFPLAYLLFNIIYWCIY 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:455710	129/459 (28%)
		LGIC_ECD_HisCl	51..235	CDD:349793	52/184 (28%)
		Cys-loop	155..169	CDD:349793	7/13 (54%)
gabrr3a	NP_001122232.1	LIC	67..471	CDD:455710	129/459 (28%)
		LGIC_ECD	88..272	CDD:475126	53/184 (29%)