DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and pHCl-2

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001303470.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster


Alignment Length:483 Identity:126/483 - (26%)
Similarity:220/483 - (45%) Gaps:51/483 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QSLAITDILPEDIK--RYDKMRPP---KKEGQ--PTIVY--FHVTVMGLDSIDENSMTYVADVFF 80
            :|:|:.::|.....  |||:|.||   .|:|:  |..:|  |::.||  .::|.:.:.:......
  Fly    68 ESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVM--KNLDSSDLQFTVQGLL 130

  Fly    81 AQTWKDHRLRLPENMTQEYRLL--EVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTI 143
            ...:.|.||.....:....:.:  |.:..|.:|.|..|..|.::.|....:..:....:|.:.|:
  Fly   131 QLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTV 195

  Fly   144 LYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIR 208
            |...:|...|.|.|||..:|.|.|:||..:||..:.|..:...|:...|:..|:.::|.:..||.
  Fly   196 LTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIG 260

  Fly   209 NETADCTQVYS---------TGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEA 264
            :...:..:|.:         .||::.:.....|.|.:.|||.:.::|:.|||.:||||||::.:.
  Fly   261 SLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQ 325

  Fly   265 APARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVL---SD 326
            .|||.|||.|:||:..|.....:::|..|||:...:.:..|||:|:|.:|:|:..:|.:.   :|
  Fly   326 TPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNND 390

  Fly   327 TPIPK-PMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNR 390
            ..:.| ...|..|.......||...    .|...|.|    ||..::...::|      ....|.
  Fly   391 LQLKKRTTKYIVKSTFVPHLKKHRR----HGYRRTDS----TMSTMSTTSMDK------TCGPNN 441

  Fly   391 RIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKR- 454
            .::|     :..|:...|. :.|::|.|.|.............::.|    ||..|.|....|. 
  Fly   442 TVIT-----IETPIIIGGS-LSREDSAISLDEQDETSTSESSDSSKE----KPAQTFATMTPKEV 496

  Fly   455 AIYIDRSSRVLFPALFASLNGIYWCVFY 482
            :::|||..|.:||..|...|.::|.:.|
  Fly   497 SLWIDRKMRFVFPLSFIVFNALFWTLVY 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 123/474 (26%)
Neur_chan_LBD 38..235 CDD:280998 51/216 (24%)
Neur_chan_memb 243..>334 CDD:280999 34/94 (36%)
pHCl-2NP_001303470.1 LIC 46..522 CDD:273305 125/479 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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