DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and pHCl-2

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_651861.1 Gene:pHCl-2 / 43703 FlyBaseID:FBgn0039840 Length:526 Species:Drosophila melanogaster


Alignment Length:483 Identity:126/483 - (26%)
Similarity:220/483 - (45%) Gaps:51/483 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QSLAITDILPEDIK--RYDKMRPP---KKEGQ--PTIVY--FHVTVMGLDSIDENSMTYVADVFF 80
            :|:|:.::|.....  |||:|.||   .|:|:  |..:|  |::.||  .::|.:.:.:......
  Fly    68 ESMALMELLTRLTAPCRYDRMVPPVVHNKDGEEVPMDIYARFYIYVM--KNLDSSDLQFTVQGLL 130

  Fly    81 AQTWKDHRLRLPENMTQEYRLL--EVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTI 143
            ...:.|.||.....:....:.:  |.:..|.:|.|..|..|.::.|....:..:....:|.:.|:
  Fly   131 QLRYLDPRLAFSSYLPNRRQPIMGESELKKMLWVPHIFLTNEQASTVLGTSAKDELTSIYPNGTV 195

  Fly   144 LYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIR 208
            |...:|...|.|.|||..:|.|.|:||..:||..:.|..:...|:...|:..|:.::|.:..||.
  Fly   196 LTSTRLQATLYCWMNFQKFPFDEQKCKTTLESWMYNTTLVQLHWETDNPVSFDKQLQLTEYNLIG 260

  Fly   209 NETADCTQVYS---------TGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEA 264
            :...:..:|.:         .||::.:.....|.|.:.|||.:.::|:.|||.:||||||::.:.
  Fly   261 SLYNESIRVSNESYMSHGSLEGNYSIISFTVLLTREVGYYVIDYFLPSIMIVTISWVSFWLQADQ 325

  Fly   265 APARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVL---SD 326
            .|||.|||.|:||:..|.....:::|..|||:...:.:..|||:|:|.:|:|:..:|.:.   :|
  Fly   326 TPARTTLGCTTLLSFITLSLSQENNLMKVSYVTMSEVWFLVCTIFIFGSLVEFAFVNTIWRRNND 390

  Fly   327 TPIPK-PMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNR 390
            ..:.| ...|..|.......||...    .|...|.|    ||..::...::|      ....|.
  Fly   391 LQLKKRTTKYIVKSTFVPHLKKHRR----HGYRRTDS----TMSTMSTTSMDK------TCGPNN 441

  Fly   391 RIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKR- 454
            .::|     :..|:...|. :.|::|.|.|.............::.|    ||..|.|....|. 
  Fly   442 TVIT-----IETPIIIGGS-LSREDSAISLDEQDETSTSESSDSSKE----KPAQTFATMTPKEV 496

  Fly   455 AIYIDRSSRVLFPALFASLNGIYWCVFY 482
            :::|||..|.:||..|...|.::|.:.|
  Fly   497 SLWIDRKMRFVFPLSFIVFNALFWTLVY 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 123/474 (26%)
LGIC_ECD_HisCl 51..235 CDD:349793 43/198 (22%)
Cys-loop 155..169 CDD:349793 7/13 (54%)
pHCl-2NP_651861.1 LIC 46..522 CDD:455710 125/479 (26%)

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