DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and HisCl1

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_731632.1 Gene:HisCl1 / 41426 FlyBaseID:FBgn0037950 Length:426 Species:Drosophila melanogaster


Alignment Length:469 Identity:226/469 - (48%)
Similarity:287/469 - (61%) Gaps:92/469 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 MKHYAKGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVF 79
            :.||     :.||::.||||...|.|||.|.||..||||:|||||||:.||||:|.|||||.|:|
  Fly    47 VSHY-----ESSLSLPDILPIPSKTYDKNRAPKLLGQPTVVYFHVTVLSLDSINEESMTYVTDIF 106

  Fly    80 FAQTWKDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTIL 144
            .||:|:|.||||||||:::||:|:||||.::||||.||||||.|||..|:|||||:|||.|||:|
  Fly   107 LAQSWRDPRLRLPENMSEQYRILDVDWLHSIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLL 171

  Fly   145 YMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIRN 209
            ||.||||.|||.|.|..||||||.|.:.:||||||.:||:|.|:.|.||||:..|||||:.:..|
  Fly   172 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTVEDLVFIWNMTDPLVVNTEIELPQLDISNN 236

  Fly   210 ETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVT 274
            .|.|||..|||||||||.:||.|:|||.|::|:||||:.:||:|||:||||||||.|||||||||
  Fly   237 YTTDCTIEYSTGNFTCLAIVFNLRRRLGYHLFHTYIPSALIVVMSWISFWIKPEAIPARVTLGVT 301

  Fly   275 SLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKP 339
            |||||:||:.:||.|||||||:||:|.:||.|:||||::|||:.::|..:               
  Fly   302 SLLTLATQNTQSQQSLPPVSYVKAIDVWMSSCSVFVFLSLMEFAVVNNFM--------------- 351

  Fly   340 VAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVRPPL 404
                ||              .|:|   .|...:||.|..::.:...:..:|      ..::.|..
  Fly   352 ----GP--------------VATK---AMKGYSDENISDLDDLKSALQHHR------ESIIEPQY 389

  Fly   405 D--ADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLFP 467
            |  ..|.                                           ..|||||:.||..||
  Fly   390 DTFCHGH-------------------------------------------ATAIYIDKFSRFFFP 411

  Fly   468 ALFASLNGIYWCVF 481
            ..|..||.:||..|
  Fly   412 FSFFILNIVYWTTF 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 221/451 (49%)
Neur_chan_LBD 38..235 CDD:280998 130/196 (66%)
Neur_chan_memb 243..>334 CDD:280999 56/90 (62%)
HisCl1NP_731632.1 Neur_chan_LBD 67..262 CDD:280998 129/194 (66%)
Neur_chan_memb 270..>350 CDD:280999 56/79 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I2918
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.980

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