Protein Alignment ort and gabra6a

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_005173169.1
• Gene: gabra6a / 393704
• ZFINID: ZDB-GENE-040426-1692
• Length: 435
• Species: Danio rerio
• Alignment Length: 487
• Identity: 134/487 - (27%)
• Similarity: 212/487 - (43%)
• Gaps: 77/487 - (15%)

  Fly     5 IIILVICTICMKHYAKGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDE 69
            :::..:|...:.:....:...|..||.||...::.||....|......|.|...:.|.....:.:
Zfish     3 LLLAFLCLTSVTNVIGKQKINSENITRILDGLLEGYDNRLRPGSGVSVTEVKTDIFVTSFGPVSD 67

  Fly    70 NSMTYVADVFFAQTWKDHRLR-------LPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQT 127
            .:|.:..|:||.|.|.|.||.       ||.|    .|:::     .:|.||:||:||:......
Zfish    68 VNMEFTMDMFFRQMWVDERLAFQGPIEILPLN----NRMVD-----KIWTPDTFFRNARKSLAHN 123

  Fly   128 MTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTP 192
            ||.||....:.::.|:.|.::||:...|.|....:|.|...|.|...|.::|..::::.|.....
Zfish   124 MTSPNKLFRIMQNGTVFYTMRLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLE 188

  Fly   193 LVVD---ENIELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMS 254
            ..||   |:..|.|..|:.......|..:|||.::...|.|.|:|:|.|::..||||..|:|::|
Zfish   189 ASVDFPPESSSLLQYDLLGQTLFTETYKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLS 253

  Fly   255 WVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCL 319
            .|||||..|:.|||...|:|::||::|....::||||.|||..|:|.|::||..||..||:|:..
Zfish   254 QVSFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDWFIAVCFAFVASALVEFAA 318

  Fly   320 INIVLSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFD 384
            :|.                 .|.....:|....|.|  :...|:.|.     :|::.|..:....
Zfish   319 VNY-----------------YATLEANRENHKLPRG--SIVESQAQG-----SDDEPESPQSDTS 359

  Fly   385 EMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQ 449
            ..::.||        ..|..:|     ||....|.|..:..||                     .
Zfish   360 AYSRKRR--------GYPVSEA-----PRTRVPIFLQGSAFPP---------------------N 390

  Fly   450 ERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
            ..|.....||:.||:|||..|...|.:||.::
Zfish   391 MMLAGTSAIDKYSRILFPLAFGIFNLVYWYIY 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	130/459 (28%)
		Neur_chan_LBD	38..235	CDD:280998	56/206 (27%)
		Neur_chan_memb	243..>334	CDD:280999	39/90 (43%)
gabra6a	XP_005173169.1	LIC	2..422	CDD:273305	134/485 (28%)
		Neur_chan_LBD	28..234	CDD:280998	59/214 (28%)
		Neur_chan_memb	242..419	CDD:280999	67/234 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810