Sequence 1: | NP_524406.1 | Gene: | ort / 45910 | FlyBaseID: | FBgn0003011 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
Alignment Length: | 506 | Identity: | 95/506 - (18%) |
---|---|---|---|
Similarity: | 180/506 - (35%) | Gaps: | 154/506 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVFQIIILVICTICMKHYAKGEFQQSLAITDILPEDIKRYDKM-RPPKKEGQPTIVYFHVTVMGL 64
Fly 65 DSIDENSMTYVADVFFAQTWKDHRLRLPENMTQEYRLLEVDWL--KNMWRPD-SFFKNAKSVTFQ 126
Fly 127 TMTIPNHYMWLYKDKTILYMVKLTL-------KLSCIMNFAIYPHDTQECKLQMESLSHTTDDLI 184
Fly 185 FQWDPTTPLVVDENIELPQVALIRNET-ADCTQVYSTGNFTCLEV-------------------- 228
Fly 229 -VFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPP 292
Fly 293 VS------------------------------------------YLKAVDAFMSVCTVFVFMA-- 313
Fly 314 -------LMEYCLINIVLSDTPIPKPMAYPPKPVAGDGPKKE----------------------- 348
Fly 349 -GE-GAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTR 397 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ort | NP_524406.1 | LIC | 31..481 | CDD:273305 | 90/476 (19%) |
Neur_chan_LBD | 38..235 | CDD:280998 | 43/229 (19%) | ||
Neur_chan_memb | 243..>334 | CDD:280999 | 25/141 (18%) | ||
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 95/506 (19%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 46/244 (19%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 43/231 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |