Protein Alignment ort and nAChRbeta3

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: NP_525098.1
• Gene: nAChRbeta3 / 33228
• FlyBaseID: FBgn0031261
• Length: 441
• Species: Drosophila melanogaster
• Alignment Length: 311
• Identity: 68/311 - (21%)
• Similarity: 115/311 - (36%)
• Gaps: 74/311 - (23%)

  Fly    40 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKD-HRLRLP---ENMTQEYR 100
            ||....|..:|.||.|...:.|..:| |||.:.......:....|:| .|:..|   :|:||
  Fly    62 YDSDVQPVFQGTPTNVSLEMVVTYID-IDELNGKLTTHCWLNLRWRDEERVWQPSQYDNITQ--- 122

  Fly   101 LLEVDWLKN--MWRPDSFFKNA-----KSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIMN 158
                ..||:  :|.|.....|.     .:.|..|::...|:.|:.......|         |.:|
  Fly   123 ----ITLKSSEVWTPQITLFNGDEGGLMAETQVTLSHDGHFRWMPPAVYTAY---------CELN 174

  Fly   159 FAIYPHDTQECKLQM-----------------ESLSHTTDDLIFQWDPTTPLVVDENIELPQVAL 206
            ...:|||.|.|||::                 |||.|  |||               ::.|:..:
  Fly   175 MLNWPHDKQSCKLKIGSWGLKVVLPENGTARGESLDH--DDL---------------VQSPEWEI 222

  Fly   207 IRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTL 271
            :.:.....:|.|    :..:|...|.:||...|....|.|...|||::..:||:.|.....::.:
  Fly   223 VDSRAHFVSQDY----YGYMEYTLTAQRRSSMYTAVIYTPASCIVILALSAFWLPPHMGGEKIMI 283

  Fly   272 GVTSLLTLSTQHAKSQSSLPPVS--------YLKAVDAFMSVCTVFVFMAL 314
            ....::.::.........||.:|        :......::||.|:...:.|
  Fly   284 NGLLIIVIAAFLMYFAQLLPVLSNNTPLVVIFYSTSLLYLSVSTIVEVLVL 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	68/311 (22%)
		Neur_chan_LBD	38..235	CDD:280998	50/222 (23%)
		Neur_chan_memb	243..>334	CDD:280999	15/80 (19%)
nAChRbeta3	NP_525098.1	LIC	39..437	CDD:273305	68/311 (22%)
		Neur_chan_LBD	52..247	CDD:280998	50/222 (23%)
		Neur_chan_memb	255..434	CDD:280999	15/80 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010