Protein Alignment ort and Gabrr2

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_038965308.1
• Gene: Gabrr2 / 29695
• RGDID: 61902
• Length: 491
• Species: Rattus norvegicus
• Alignment Length: 485
• Identity: 147/485 - (30%)
• Similarity: 235/485 - (48%)
• Gaps: 87/485 - (17%)

  Fly    23 FQQSLAITDI---LPEDIKRYD----KMRPPKKEGQPTI-VYFHVTVMGLDSIDENSMTYVADVF 79
            ::::|.:|.|   .|..:.|.:    .|||  ..|.|.| |...|.|..||||.|..|.:...::
  Rat    67 YKKNLDVTKIRTGKPRPLLRVEDHDFTMRP--AFGGPAIPVGVDVQVESLDSISEVDMDFTMTLY 129

  Fly    80 FAQTWKDHRLRLP----ENMTQEYRLLEVDWLKNMWRPDSFFKNAK-SVTFQTMTIPNHYMWLYK 139
            ....|:|.||..|    .:||.:.||     :|.:|.||.||.::| |.|..| |..|..:.::.
  Rat   130 LRHYWRDERLAFPSSSNRSMTFDGRL-----VKKIWVPDVFFVHSKRSFTHDT-TTDNIMLRVFP 188

  Fly   140 DKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQW-DPTTPLVVDENIELPQ 203
            |..:||.:::|:...|.|:|:.:|.|:|.|.|::||.::|.:||:..| :....|..||.|.|.|
  Rat   189 DGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQ 253

  Fly   204 VALIRNETADCTQVY-STGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPA 267
            ..:.:..|......| |||.:..|.:.|||:|.:.:::..||.|..::|::|||||||...|.||
  Rat   254 FLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPA 318

  Fly   268 RVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIV--------- 323
            ||:||:.::||:||......:|:|.|||::|||.::.|..||||::::||..:|.:
  Rat   319 RVSLGIMTVLTMSTIITGVNASMPRVSYIRAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEQKER 383

  Fly   324 -LSDT-PIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEM 386
             |.|. |....|.: .:.:..||...|.|      :||.|...::.:||    :.|:.:||...:
  Rat   384 KLRDKFPCTCGMLH-SRTMTLDGSYSESE------ANSLAGYPRSHILP----EEERQDKIVVHL 437

  Fly   387 TKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQER 451
            ..|..:.::.::.:          :..|....|...|.|
  Rat   438 ALNSELTSSRKKGL----------LKGQMGLYIFQNTHA-------------------------- 466

  Fly   452 LKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
                  ||:.||::|||.:...|.|||.||
  Rat   467 ------IDKYSRLIFPAFYIVFNLIYWSVF 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	143/475 (30%)
		Neur_chan_LBD	38..235	CDD:280998	70/208 (34%)
		Neur_chan_memb	243..>334	CDD:280999	41/101 (41%)
Gabrr2	XP_038965308.1	LIC	87..490	CDD:273305	140/463 (30%)
		LGIC_ECD_GABAAR_rho	102..287	CDD:349806	65/190 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810