Protein Alignment ort and Gabra2

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_017454595.1
• Gene: Gabra2 / 289606
• RGDID: 61856
• Length: 504
• Species: Rattus norvegicus
• Alignment Length: 488
• Identity: 139/488 - (28%)
• Similarity: 225/488 - (46%)
• Gaps: 68/488 - (13%)

  Fly     3 FQIIILVI---CTICMKHYAKGEFQQSLAI-TDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMG 63
            |.:::|::   ..:.:.:..:.|.:.::.| |.||...:..||....|......|.|:.::.|..
  Rat    65 FPLLVLLVWNPARLVLANIQEDEAKNNITIFTRILDRLLDGYDNRLRPGLGDSITEVFTNIYVTS 129

  Fly    64 LDSIDENSMTYVADVFFAQTWKDHRLRL--PENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQ 126
            ...:.:..|.|..||||.|.|||.||:.  |.|:.:...|:    ...:|.||:||.|.|.....
  Rat   130 FGPVSDTDMEYTIDVFFRQKWKDERLKFKGPMNILRLNNLM----ASKIWTPDTFFHNGKKSVAH 190

  Fly   127 TMTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWD--- 188
            .||:||..:.:..|.|:||.::||::..|.|:...:|.|...|.|:..|.::||.::.:.|.
  Rat   191 NMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHSCPLKFGSYAYTTSEVTYIWTYNA 255

  Fly   189 PTTPLVVDENIELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIM 253
            ..:..|..:...|.|..|:.......|...|||.:|.:...|.|||::.|:|..||:|..|.||:
  Rat   256 SDSVQVAPDGSRLNQYDLLGQSIGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVIL 320

  Fly   254 SWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYC 318
            |.||||:..|:.|||...|||::||::|....:::|||.|:|..|:|.|::||..|||.||:|:.
  Rat   321 SQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFA 385

  Fly   319 LINIVLSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIF 383
            .:|....     :..|:..|.|..|..|::|         |...:..|..:.:|:
  Rat   386 TVNYFTK-----RGWAWDGKSVVNDKKKEKG---------SVMIQNNAYAVAVAN---------- 426

  Fly   384 DEMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPA 448
                            ..|.|..|.           :..||:.....|:|    .:.|:.|...|
  Rat   427 ----------------YAPNLSKDP-----------VLSTISKSATTPEP----NKKPENKPAEA 460

  Fly   449 QERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
            ::.......|||.||::||.||.:.|.:||..:
  Rat   461 KKTFNSVSKIDRMSRIVFPVLFGTFNLVYWATY 493

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	134/454 (30%)
		Neur_chan_LBD	38..235	CDD:280998	60/201 (30%)
		Neur_chan_memb	243..>334	CDD:280999	38/90 (42%)
Gabra2	XP_017454595.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810