DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and GLRB

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_000815.1 Gene:GLRB / 2743 HGNCID:4329 Length:497 Species:Homo sapiens


Alignment Length:499 Identity:156/499 - (31%)
Similarity:249/499 - (49%) Gaps:70/499 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KGEFQQSLAITDILPEDIKR----------------YDKMRPPKKEGQPTIVYFHVTVMGLDSID 68
            ||:.:|.|..:....||:.|                ||....|..:|.|..|..::.:....||.
Human    31 KGKKKQYLCPSQQSAEDLARVPANSTSNILNRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQ 95

  Fly    69 ENSMTYVADVFFAQTWKDHRLRLPENMTQEYR---LLEVD--WLKNMWRPDSFFKNAKSVTFQTM 128
            |.:|.|..::|..|.|.|.||:||    .::|   .|.||  ..|.:|:||.||.|.||..|..:
Human    96 ETTMDYRVNIFLRQKWNDPRLKLP----SDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDV 156

  Fly   129 TIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPL 193
            |..|..:::::|..:|..::|::.|||.::..::|.|||.||:|:||..:|||||.|.|....|:
Human   157 TQENILLFIFRDGDVLVSMRLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPV 221

  Fly   194 VVDENIELPQVALIRN--ETADCTQVY-STGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSW 255
            .: |.|.|||..:.:.  |..:||:.| .||.:||:||:|||:|::.:|:...|.||.:||::||
Human   222 QL-EKIALPQFDIKKEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSW 285

  Fly   256 VSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLI 320
            :||||.|:|:.|||.||:.|:|:|:::.....:.||.|||:||:|.::..|.:|.|.:|:||.::
Human   286 LSFWINPDASAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVV 350

  Fly   321 NIVLSDTPIPKPM----AYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEK 381
            .::|::   ||.:    |...|....||  |.|..|.....|.|.:....:.|.:.:.:.:|:..
Human   351 QVMLNN---PKRVEAEKARIAKAEQADG--KGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCT 410

  Fly   382 IFDEMTKN---------RRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPE 437
            ...::..|         |....:.......|::.:......|...       ...|||.:|..| 
Human   411 SKSDLRSNDFSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKN-------NKKPPPAKPVIP- 467

  Fly   438 PELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
                    |.|:.       ||..:|.|||..|...|.|||.::
Human   468 --------TAAKR-------IDLYARALFPFCFLFFNVIYWSIY 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 152/486 (31%)
LGIC_ECD_HisCl 51..235 CDD:349793 72/191 (38%)
Cys-loop 155..169 CDD:349793 5/13 (38%)
GLRBNP_000815.1 LIC 43..496 CDD:455710 152/485 (31%)
LGIC_ECD_GlyR_beta 79..265 CDD:349811 72/190 (38%)
Cys-loop 183..197 CDD:349811 5/13 (38%)

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