DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and GLRA2

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001112357.1 Gene:GLRA2 / 2742 HGNCID:4327 Length:452 Species:Homo sapiens


Alignment Length:477 Identity:158/477 - (33%)
Similarity:240/477 - (50%) Gaps:71/477 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CMKHYAKGEFQ--QSLAITDILPEDIKR---YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMT 73
            |..|.::...|  |:|:.:|.|.:.:.|   ||....|..:|.|..|..::.:....|:.|.:|.
Human    27 CKDHDSRSGKQPSQTLSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMD 91

  Fly    74 YVADVFFAQTWKDHRL---RLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYM 135
            |..::|..|.|.|.||   ..|::...    |:...|.::|:||.||.|.|...|..:|..|..:
Human    92 YRVNIFLRQQWNDSRLAYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLL 152

  Fly   136 WLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIE 200
            .:.|:..:||.::|||.|||.|:...:|.|.|.|.:|:||..:|.:||||:|....|:.|.|.:.
Human   153 RISKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLT 217

  Fly   201 LPQVAL-IRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEA 264
            |||..| ...|...||:.|:||.|||:||.|.|:|::.||:...|||:.:|||:|||||||..:|
Human   218 LPQFILKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 282

  Fly   265 APARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPI 329
            |||||.||:|::||::||.:.|::|||.|||:||:|.:|:||.:|||.||:||..:|.|      
Human   283 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV------ 341

  Fly   330 PKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVT 394
                                            |:|....|.|  .:.:|.:...:::|:..|...
Human   342 --------------------------------SRQHKEFLRL--RRRQKRQNKEEDVTRESRFNF 372

  Fly   395 TTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYID 459
            :...:        |..:..::...:......|.|.||:    :.:..|.|..   :|.||   ||
Human   373 SGYGM--------GHCLQVKDGTAVKATPANPLPQPPK----DGDAIKKKFV---DRAKR---ID 419

  Fly   460 RSSRVLFPALFASLNGIYWCVF 481
            ..||..||..|...|..||..:
Human   420 TISRAAFPLAFLIFNIFYWITY 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 153/456 (34%)
Neur_chan_LBD 38..235 CDD:280998 73/203 (36%)
Neur_chan_memb 243..>334 CDD:280999 48/90 (53%)
GLRA2NP_001112357.1 LIC 46..441 CDD:273305 153/456 (34%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 236..241 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45222
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.930

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