Sequence 1: | NP_524406.1 | Gene: | ort / 45910 | FlyBaseID: | FBgn0003011 | Length: | 485 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000803.2 | Gene: | GABRB1 / 2560 | HGNCID: | 4081 | Length: | 474 | Species: | Homo sapiens |
Alignment Length: | 512 | Identity: | 147/512 - (28%) |
---|---|---|---|
Similarity: | 246/512 - (48%) | Gaps: | 87/512 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 FQIIILVICTICMKHYAKGEFQQSLAITDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSI 67
Fly 68 DENSMTYVADVFFAQTWKDHRLR---LPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMT 129
Fly 130 IPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLV 194
Fly 195 VDEN-IELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSF 258
Fly 259 WIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIV 323
Fly 324 LSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTK 388
Fly 389 NRRIVTTTRRVVRPPLDADGPWIPRQES--RIILTPTIAPPPPPPQPAAPEPELPKPKLT----- 446
Fly 447 --------PAQERLKRAI--------------YIDRSSRVLFPALFASLNGIYWCVF 481 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ort | NP_524406.1 | LIC | 31..481 | CDD:273305 | 142/482 (29%) |
Neur_chan_LBD | 38..235 | CDD:280998 | 66/200 (33%) | ||
Neur_chan_memb | 243..>334 | CDD:280999 | 38/90 (42%) | ||
GABRB1 | NP_000803.2 | LIC | 9..472 | CDD:273305 | 147/510 (29%) |
Agonist binding. /evidence=ECO:0000250 | 120..122 | 1/1 (100%) | |||
Agonist binding. /evidence=ECO:0000250 | 180..182 | 1/1 (100%) | |||
Allosteric effector binding. /evidence=ECO:0000250 | 290..311 | 6/20 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |