DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and exp-1

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_495229.3 Gene:exp-1 / 186801 WormBaseID:WBGene00001373 Length:539 Species:Caenorhabditis elegans


Alignment Length:293 Identity:84/293 - (28%)
Similarity:147/293 - (50%) Gaps:19/293 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RYDKMRPPKKE-GQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRL----RLPENMTQE 98
            :||..:.|:.| |:.|.|...|.|..:.::.|.:|.|..::|:.::|:|.||    :|.:|.|: 
 Worm   110 QYDHRQVPENEKGEATYVEVSVVVSNIRAVSEVTMDYALELFYRESWRDPRLQYDRKLFKNKTE- 173

  Fly    99 YRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKT--ILYMVKLTLKLSCIMNFAI 161
             ..|...:...:|.||:|..||.:.........:|...|..|:|  :||..:::|...|.|:..:
 Worm   174 -LALHESYTNFLWFPDTFVPNAIASKNPQRNSISHRSLLRLDETGKLLYSRRISLVCECTMDLTL 237

  Fly   162 YPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVD-ENIELPQVALIRNETADCTQVYSTGNFTC 225
            :|.|.|.|||.:||..:|.|.::::|.......:: :.|.||...:.........:.|:|||::.
 Worm   238 FPFDKQLCKLGIESYGYTADHVVYKWSKGARTALELKKIRLPDFTIQEAYVTSQMESYATGNYSR 302

  Fly   226 LEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAA---PARVTLGVTSLLTLSTQHAKSQ 287
            |.|.|...|...:......||:..:||.||||.|::.|..   ...:.|.:|.|:      ....
 Worm   303 LYVCFVFSRSSGFCFLQLIIPSTAVVITSWVSLWMETETEFQDMISIILAITFLI------FSYN 361

  Fly   288 SSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLI 320
            ..:|.|||:||:|.::.||.:.||::|::..|:
 Worm   362 EMMPRVSYIKAMDIYLGVCFMIVFLSLIKLALV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 84/293 (29%)
Neur_chan_LBD 38..235 CDD:280998 57/203 (28%)
Neur_chan_memb 243..>334 CDD:280999 26/81 (32%)
exp-1NP_495229.3 LIC 103..515 CDD:273305 84/293 (29%)
Neur_chan_LBD 111..311 CDD:280998 57/201 (28%)
Neur_chan_memb 320..>397 CDD:280999 26/81 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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