DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and acc-3

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_508810.2 Gene:acc-3 / 186307 WormBaseID:WBGene00018880 Length:517 Species:Caenorhabditis elegans


Alignment Length:495 Identity:134/495 - (27%)
Similarity:224/495 - (45%) Gaps:68/495 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 AKGEFQQSLAITD--ILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFA 81
            |..|..:.|..:|  |:.:.:..|...|.|.:.|  .||:..|.|..::|::|.:..:..|::..
 Worm    54 ATDEDGEELCTSDKTIIEKLLNNYKSFRTPSESG--VIVWIEVWVQEVNSVNEITSDFDMDIYVT 116

  Fly    82 QTWKDHRLRLPENMTQEYRL-LEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILY 145
            :.|.|..||.......:|.| |..:.|..:|:|::.|.|:||.........|.::.:|.:.|:..
 Worm   117 ELWMDSALRYEHLNPCKYNLSLNSEILDQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTVWV 181

  Fly   146 MVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQW-DPTTPL-VVDENIELPQVALIR 208
            ..::.:|..|.|:|:.:|.|.|.|.|.:||.|:...::..|| :.|||| ::.:.|.||...:..
 Worm   182 NYRVQVKGPCSMDFSAFPMDQQSCHLTLESFSYNNQEVDMQWMNWTTPLSLLKKEIVLPDFVMSN 246

  Fly   209 NETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGV 273
            ..|:...::|..|.:..|.:.|...||..:|:|..||||.:.:.:||:||.:.|:..|||..|||
 Worm   247 YSTSLKHEIYPAGVWNELTMTFVFSRRYGWYIFQAYIPTYLTIFISWISFCLGPKMIPARTMLGV 311

  Fly   274 TSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPK 338
            .|||.|:.|......:||.|||:||:|.:|.||..|||.:|:|..:|                  
 Worm   312 NSLLALTFQFGNIMRNLPRVSYVKALDVWMLVCLTFVFCSLLELAII------------------ 358

  Fly   339 PVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRI----VTTTRRV 399
                            |...:.:..:||......||:..|.:|..:..|.:..:    ...:.|:
 Worm   359 ----------------GSMGARSENRQAQQQKQQDEEATKHQKGRENSTCSHLMSPSSCPNSPRI 407

  Fly   400 VRPPLDAD--------GPWIPRQESRIIL--TPTIAPPPPPPQ-------PAAPEPELPKPKL-- 445
            .|..:..|        |...||...|:|:  :.||:..|...:       ....|.:..:.:.  
 Worm   408 CRNHIPNDVPQSFKSYGSTDPRMRKRLIIASSSTISHAPNANRSEKVLLLDGLEETQFSQVETKF 472

  Fly   446 -TPAQERLKR---AIYIDRSSRVLFPALFASLNGIYWCVF 481
             :.|..::|:   ...|||.|.::||.||...|.|||..:
 Worm   473 SSMASIKMKKHWTTEEIDRLSMIMFPGLFTLFNIIYWTYY 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 131/481 (27%)
Neur_chan_LBD 38..235 CDD:280998 54/199 (27%)
Neur_chan_memb 243..>334 CDD:280999 37/90 (41%)
acc-3NP_508810.2 Neur_chan_LBD 69..512 CDD:332142 130/478 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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