DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and acc-2

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_501567.1 Gene:acc-2 / 183758 WormBaseID:WBGene00008280 Length:445 Species:Caenorhabditis elegans


Alignment Length:471 Identity:110/471 - (23%)
Similarity:187/471 - (39%) Gaps:112/471 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TDILPEDIK--RYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRLRLP 92
            |||:...:.  .|:|.|.|::||...:|  .:.:..:.||||.:..:..|::..:||.|..|...
 Worm    51 TDIIDRLLNGTGYNKFRIPQEEGMTVVV--EIWIQAITSIDELTNDFDMDIYITETWLDPALNFQ 113

  Fly    93 E------NMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTL 151
            .      |::..:::|:     .:|.|:|.|.|:|..........:.::.|:.:.|::...::.:
 Worm   114 TMTPCKGNLSLNHQVLD-----RLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRV 173

  Fly   152 KLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQW-DPTTPLVVDENIELPQVALIRNETADCT 215
            |..|.::.:.:|.|.|:|.|..||.::...::..:| |...|:.....|.||...|...:|....
 Worm   174 KGPCSLDLSNFPLDLQKCSLIYESFNYNRQEVEMRWSDAEHPVFNLSKIMLPDFDLFEIQTERRQ 238

  Fly   216 QVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLS 280
            :.|..|.:..|.|....:||.::|....|:||.:.:.:||:||.:...|.|||..|||.|||.:.
 Worm   239 EPYPAGMWDELHVTIIFERRFIWYFMQAYLPTYLTIFISWISFSLGSRAIPARTMLGVNSLLAIV 303

  Fly   281 TQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDGP 345
            ........:||.|||:|.:|.:|.|...|:|.:|:|..::..::.|..:.|..  ..|.::|:..
 Worm   304 FSFGNIMRNLPRVSYIKGIDVWMLVSMTFIFCSLLELAIVGFMVRDETVAKKK--QQKKISGNIS 366

  Fly   346 KKEGEGA---------PPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVR 401
            ::|....         |||.|.|:.|....|                                  
 Worm   367 REESPHGIISERRFMFPPGCSESSKSLSSCT---------------------------------- 397

  Fly   402 PPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLF 466
                  ..|.|.:                                           ||..|.|:|
 Worm   398 ------SGWTPER-------------------------------------------IDSISSVMF 413

  Fly   467 PALFASLNGIYWCVFY 482
            |..|...|.|||  ||
 Worm   414 PFSFFVFNIIYW--FY 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 107/467 (23%)
LGIC_ECD_HisCl 51..235 CDD:349793 41/190 (22%)
Cys-loop 155..169 CDD:349793 4/13 (31%)
acc-2NP_501567.1 LIC 52..428 CDD:455710 109/470 (23%)
LGIC_ECD_GABAAR 76..258 CDD:349791 41/188 (22%)
Cys-loop 177..191 CDD:349791 4/13 (31%)

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