DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and glc-1

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_507090.1 Gene:glc-1 / 180086 WormBaseID:WBGene00001591 Length:461 Species:Caenorhabditis elegans


Alignment Length:448 Identity:138/448 - (30%)
Similarity:213/448 - (47%) Gaps:74/448 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRLR--LPENMTQEYRL 101
            || ::|||...|.|.:|..::.:..:..||..:|.|.|.:...::|.|.||.  :..:...::.:
 Worm    75 YDFRVRPPTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDGQPDFVI 139

  Fly   102 LEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDT 166
            |.|.  ..:|.||:||.|.|.....|:..||..:.::.|.|:||.|:::|.|||.|....||.|.
 Worm   140 LTVG--HQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDV 202

  Fly   167 QECKLQMESLSHTTDDLIFQWDPTTPLVVDENI--ELPQVALIRNETADCTQVYSTGNFTCLEVV 229
            |:|.:.:.|.::||.|:.:.|...:||.:...:  .||...|....|..||.|.:||.::||...
 Worm   203 QQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYSCLRTT 267

  Fly   230 FTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVS 294
            ..|||...:|:...|||:||:||:||||||....|.|||||||||:|||::.|.|...|.|||||
 Worm   268 IQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQLPPVS 332

  Fly   295 YLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNS 359
            |:||:|.::..|..|:|.||:|:.|:|.:.:                     |:|.      ...
 Worm   333 YIKAIDVWIGACMTFIFCALLEFALVNHIAN---------------------KQGV------ERK 370

  Fly   360 TASKQQATMLPLADEKIEKI-EKIFDEMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPT 423
            ..::::...:||.......: .|:|::..|.|.:....|::               .|.:.|..|
 Worm   371 ARTEREKAEIPLLQNLHNDVPTKVFNQEEKVRTVPLNRRQM---------------NSFLNLLET 420

  Fly   424 IAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
                              |.:.....:|      :|..||.|||.||...|.:||..|
 Worm   421 ------------------KTEWNDISKR------VDLISRALFPVLFFVFNILYWSRF 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 137/446 (31%)
Neur_chan_LBD 38..235 CDD:280998 64/199 (32%)
Neur_chan_memb 243..>334 CDD:280999 46/90 (51%)
glc-1NP_507090.1 Neur_chan_LBD 64..273 CDD:280998 64/199 (32%)
LIC 65..452 CDD:273305 136/444 (31%)
Neur_chan_memb 281..451 CDD:280999 69/235 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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