DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and mod-1

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_741580.1 Gene:mod-1 / 179269 WormBaseID:WBGene00003386 Length:489 Species:Caenorhabditis elegans


Alignment Length:503 Identity:139/503 - (27%)
Similarity:213/503 - (42%) Gaps:118/503 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRL---RLP---ENM 95
            :..|.||.|..::.....:..||..||  |::|.|..:..|:.|.|.|.|..|   .||   .|:
 Worm    42 MSNYTKMLPDAEDSVQVNIEIHVQDMG--SLNEISSDFEIDILFTQLWHDSALSFAHLPACKRNI 104

  Fly    96 TQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFA 160
            |.|.||     |..:|.|::...|:|..|.......|..:.||::.|:....:|::|..|.::..
 Worm   105 TMETRL-----LPKIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLR 164

  Fly   161 IYPHDTQECKLQMESLSHTTDDLIFQW-DPTTPLVVDENIELPQVALIRNETADCTQVYSTGNFT 224
            .:|.|||.|.|..||.||.::::...| :....|:  :.|:||...::...|...|.:|..|.:.
 Worm   165 QFPFDTQTCILIFESYSHNSEEVELHWMEEAVTLM--KPIQLPDFDMVHYSTKKETLLYPNGYWD 227

  Fly   225 CLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSS 289
            .|:|.||.|||..:|:...|:||.:.:|:|||||.::|:|.|||.|:|::|||.|:.|......:
 Worm   228 QLQVTFTFKRRYGFYIIQAYVPTYLTIIVSWVSFCMEPKALPARTTVGISSLLALTFQFGNILKN 292

  Fly   290 LPPVSYLKAVDAFMSVCTVFVFMALMEYCLI-------NIVLSDTPIPKPMA------------- 334
            ||.|||:||:|.:|..|..|||..::|...:       |.|.:.....:.|.             
 Worm   293 LPRVSYVKAMDVWMLGCISFVFGTMVELAFVCYISRCQNSVRNAERRRERMRNSQVWANGSCRTR 357

  Fly   335 --------------YPPKPVAG-----DGPKKEGEGA-----PPGGSNSTASKQQATM---LPLA 372
                          :|.....|     |.|:..|.|:     ||    |..:.|..|.   :||.
 Worm   358 SNGYANGGSVISHYHPTSNGNGNNNRHDTPQVTGRGSLHRNGPP----SPLNLQMTTFDSEIPLT 418

  Fly   373 DEKIEKIEKIFDEMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPE 437
                      ||::..:              :::|.|.|....|       .:||||....|...
 Worm   419 ----------FDQLPVS--------------MESDRPLIEEMRS-------TSPPPPSGCLARFH 452

  Fly   438 PELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEYL 485
            ||.                 :|:.|.|.||..|...|.:||   :.||
 Worm   453 PEA-----------------VDKFSIVAFPLAFTMFNLVYW---WHYL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 137/497 (28%)
Neur_chan_LBD 38..235 CDD:280998 61/203 (30%)
Neur_chan_memb 243..>334 CDD:280999 37/97 (38%)
mod-1NP_741580.1 LIC 7..479 CDD:273305 137/500 (27%)
Neur_chan_LBD 34..239 CDD:280998 62/205 (30%)
Neur_chan_memb 247..476 CDD:280999 71/280 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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