DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and glc-3

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_504441.1 Gene:glc-3 / 178930 WormBaseID:WBGene00001593 Length:484 Species:Caenorhabditis elegans


Alignment Length:501 Identity:157/501 - (31%)
Similarity:237/501 - (47%) Gaps:96/501 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TDILPEDI-KRYD-KMRP-------PKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWK 85
            |:|:.:.: |.|| ::||       |...| ..|||.::.:..:..||:.:|.|...:.|.:.|.
 Worm    28 TEIIKKLLGKGYDWRVRPPGINLTIPGTHG-AVIVYVNMLIRSISKIDDVNMEYSVQLTFREEWV 91

  Fly    86 DHRLR--LPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVK 148
            |.||.  .|.:.|.::.:|...  :.:|.|||||:|.|......:..||..:.:::|..|||.|:
 Worm    92 DGRLAYGFPGDSTPDFLILTAG--QQIWMPDSFFQNEKQAHKHDIDKPNVLIRIHRDGRILYSVR 154

  Fly   149 LTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENI--ELPQVALIRNET 211
            :::.|||.|:...||.|.|.|.:.:.|.::|.:|:.::|..|.|:.:.:.:  .||...|...:|
 Worm   155 ISMVLSCPMHLQYYPMDVQTCLIDLASYAYTENDIEYRWKKTDPVQLKKGLHSSLPSFELNNVDT 219

  Fly   212 ADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSL 276
            ..||...:||.::||..|..|:|:..||:...|||:.|:||:||||||:...|.|||||||||:|
 Worm   220 TLCTSKTNTGTYSCLRTVLELRRQFSYYLLQLYIPSTMLVIVSWVSFWLDRGAVPARVTLGVTTL 284

  Fly   277 LTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLI------------------NIV 323
            ||::||.:...:.||||||.||:|.::..|..|:|.||:|:..:                  |.:
 Worm   285 LTMTTQASGINAKLPPVSYTKAIDVWIGACLTFIFGALLEFAWVTYISSRSFYKRNKNCSSRNSL 349

  Fly   324 LSDTPIPKPMAYPPKPVAGDGPKKEGE------GAP-----PGGSNSTASKQQATMLPLADEKIE 377
            |.:|   |.....|..|....|:...|      .||     ..|:..|.|:....:....||..|
 Worm   350 LIET---KQALIIPNTVVAQFPEHPEEVEMGLAQAPDVWIRQSGNGKTVSRVNGHINHNNDEAAE 411

  Fly   378 KIEKIFDEMTKNRRIVTTTR----RVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEP 438
            .|  |||...||||.|..|.    |::|        ||..:.:                      
 Worm   412 LI--IFDAKHKNRRFVWWTNFRNIRLIR--------WIRNRLN---------------------- 444

  Fly   439 ELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVFYEY 484
                     ..:..|||   |..||||||.||...|.:||..:.:|
 Worm   445 ---------VDDNAKRA---DLISRVLFPTLFVCFNFVYWTKYSQY 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 155/495 (31%)
Neur_chan_LBD 38..235 CDD:280998 64/208 (31%)
Neur_chan_memb 243..>334 CDD:280999 46/108 (43%)
glc-3NP_504441.1 LIC 29..475 CDD:273305 155/495 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5256
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276914at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.870

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