DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and acc-1

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001293865.1 Gene:acc-1 / 177799 WormBaseID:WBGene00010275 Length:470 Species:Caenorhabditis elegans


Alignment Length:500 Identity:131/500 - (26%)
Similarity:219/500 - (43%) Gaps:80/500 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IILVICTICMKHYAKGEFQQSL----AITDILPEDIK-RYDKMRPPKKEGQPTIVYFHVTVMGLD 65
            |::...|..:...:|| ..|||    ..|:|:...:| .|:|...|   ..||.|...:.|..:.
 Worm    11 IMVSFLTELLSQSSKG-IAQSLDNCANDTEIINALLKDSYNKHYIP---SHPTHVRVDMWVQEVT 71

  Fly    66 SIDENSMTYVADVFFAQTWKDHRLRLPENMTQEYRLLEVD--WLKNMWRPDSFFKNAKSVTFQTM 128
            |:.|.:..:..|::..:.|:|..| :.|:|....|.:..|  .|:.:|.|::.|.|:||......
 Worm    72 SVSELTQDFEIDLYINEFWEDPAL-VYEDMNPCKRNISFDDKVLQRLWLPNTCFINSKSAAIHES 135

  Fly   129 TIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPL 193
            ...|.::.::.:.|:....::.|...|.|....:|.|.|:|.|..||.::.|.::..||:...|:
 Worm   136 PFKNVFLMVFSNGTLWTNYRMKLTGPCDMKLKRFPFDKQKCYLTFESFNYNTGEVRMQWNQPYPV 200

  Fly   194 VVDENIELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSF 258
            ::.:.||||...|:........|:|..|.:..|.|.|..:||..:||...||||.:.:::||:||
 Worm   201 ILLKRIELPDFKLVNFSVIAVEQMYPAGWWDELTVAFVFERRYGWYVLQGYIPTMVTIVISWISF 265

  Fly   259 WIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIV 323
            ::.|.|.|||..|||.|||.::.|......:||.|||:||:|.:|....:|:|::|:|..::   
 Worm   266 YLGPRAIPARTMLGVNSLLAMTFQFGNIIRNLPRVSYVKAIDVWMLSGMLFIFLSLLELAVV--- 327

  Fly   324 LSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTK 388
                                |.....||.||                  ..|..|.::..||...
 Worm   328 --------------------GFMSRNEGLPP------------------KVKKRKRQEDDDEGFS 354

  Fly   389 NRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAP-EPELPKPKLTPAQERL 452
            .:.:.|:      |.|:....|:.::.:.:.....:    ||.:..|| |.|.|...:|..:|:.
 Worm   355 WKSMQTS------PHLELRQFWVDKRVNSLRNDSAV----PPVEDYAPMELEQPYQNITKRREKR 409

  Fly   453 K---------------RAIYIDRSSRVLFPALFASLNGIYWCVFY 482
            |               |...:|..|.:.||..:...|..||. ||
 Worm   410 KWMSGLRKKWRAMRELRPETVDFYSAIFFPTAYMLFNISYWS-FY 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 121/468 (26%)
Neur_chan_LBD 38..235 CDD:280998 52/199 (26%)
Neur_chan_memb 243..>334 CDD:280999 33/90 (37%)
acc-1NP_001293865.1 Neur_chan_LBD 38..243 CDD:280998 55/208 (26%)
LIC 39..453 CDD:273305 121/469 (26%)
Neur_chan_memb 251..450 CDD:280999 62/249 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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