DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and unc-49

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001022785.1 Gene:unc-49 / 176472 WormBaseID:WBGene00006784 Length:506 Species:Caenorhabditis elegans


Alignment Length:535 Identity:148/535 - (27%)
Similarity:241/535 - (45%) Gaps:103/535 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FQIIILVICTICMKHYAKGEFQQSLAITDILPEDIKR------YDKMRPPKKEGQPTIVYFHVTV 61
            |.:|:|:...:|: |....:.:.|...|.:|...:.|      |||...|:...:|..|...:.|
 Worm     5 FTLIVLLSAHLCL-HVVVTQDEDSHINTQLLSSVLDRLTNRTTYDKRLRPRYGEKPVDVGITIHV 68

  Fly    62 MGLDSIDENSMTYVADVFFAQTWKDHRL---RLPENMTQEYRLLE--VDWLKNMWRPDSFFKNAK 121
            ..:.::.|..|.:..|.:..|||:|.||   .|...:::|...|.  ||:|..:|:||:||.|.|
 Worm    69 SSISAVSEVDMDFTLDFYMRQTWQDPRLAFGSLDLGLSKEIDSLTVGVDYLDRLWKPDTFFPNEK 133

  Fly   122 SVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQ 186
            ...|...|..|.::.:..|.|:....:||:..:|.|:..::|.|:|.|||::||..:.|.|:.:.
 Worm   134 KSFFHLATTHNSFLRIEGDGTVYTSQRLTVTATCPMDLKLFPMDSQHCKLEIESYGYETKDIDYY 198

  Fly   187 W-----DPTTPLVVDENIELPQ-------VALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYY 239
            |     |.....|..:..:|||       |...:.||       |:|.:..|.:...|.|.:.:|
 Worm   199 WGKKRTDLEITAVKFDTFQLPQFQPTLYFVNTTKAET-------SSGKYVRLALEVILVRNMGFY 256

  Fly   240 VFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMS 304
            ..|..||:.:||.:||||||:..||:||||.||||::||::|....:.:|:|.|||:|.:|.|::
 Worm   257 TMNIVIPSILIVTISWVSFWLNREASPARVGLGVTTVLTMTTLITTTNNSMPKVSYVKGLDVFLN 321

  Fly   305 VCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATML 369
            .|.|.||.:|:||.::             :|..|.:.....|:          ...|.:||...:
 Worm   322 FCFVMVFASLLEYAIV-------------SYMNKRLVLRREKR----------RKAAEQQQRNEM 363

  Fly   370 PLADEKIEKIEKIFDEMTKNRRIVTTTRRVVRP-----------------PLDADGPWIPRQESR 417
            |:.:...:.......|||...:..|..:..|:.                 |.:.|...||..:..
 Worm   364 PMFNASPKAANNNSYEMTLMSQNSTPAKSYVQADLYFAGHNSSMNPLMEIPENCDCRTIPMMQHP 428

  Fly   418 IILTP---TIAPPPPPPQPAAPEPELPKPK---------LTPAQERLKRAIYIDRSSRVLFPALF 470
            .::|.   |:.|.|           ..:||         .|||:        ||:.||..||..|
 Worm   429 RLVTDGAHTLWPAP-----------FARPKKASKTCCQRWTPAK--------IDKLSRYGFPLSF 474

  Fly   471 ASLNGIYWCVFYEYL 485
            :..|.:|| ::.:||
 Worm   475 SIFNIVYW-LYMKYL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 139/501 (28%)
LGIC_ECD_HisCl 51..235 CDD:349793 57/200 (29%)
Cys-loop 155..169 CDD:349793 5/13 (38%)
unc-49NP_001022785.1 LIC 37..484 CDD:455710 138/496 (28%)

Return to query results.
Submit another query.