DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and glra1

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002940962.2 Gene:glra1 / 100498379 XenbaseID:XB-GENE-6035798 Length:450 Species:Xenopus tropicalis


Alignment Length:484 Identity:155/484 - (32%)
Similarity:225/484 - (46%) Gaps:121/484 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRL---RLP 92
            |.|...|..||....|..:|.|..|..::.:....||.|.:|.|..::|..|.|.|.||   ..|
 Frog    44 DKLMGKISGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRLNIFLRQQWNDPRLAYSEYP 108

  Fly    93 ENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIM 157
            ::...    |:...|.::|:||.||.|.|...|..:|..|..:.::|:..:||.::|||.|:|.|
 Frog   109 DDSLD----LDPSMLDSIWKPDLFFANEKGANFHEITTDNKLLRIFKNGNVLYSIRLTLTLACPM 169

  Fly   158 NFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIRNETAD---CTQVYS 219
            :...:|.|.|.|.:|:||..:|.:||||:|:....:.|.|.:.|||  .|..|..|   ||:.||
 Frog   170 DLKNFPMDVQTCIMQLESFGYTMNDLIFEWEEVGAVQVAEGLTLPQ--FILKEEKDLRYCTKHYS 232

  Fly   220 TGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHA 284
            ||.|||:|..|.|:|::.||:...|||:.:|||:|||||||..:||||||.||:|::||::||.:
 Frog   233 TGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSS 297

  Fly   285 KSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPM---------------- 333
            .|::|||.|||:||:|.:|:||.:|||.||:||..:|.|...   .|.:                
 Frog   298 GSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQ---HKELLRFRRRRRHHKEDENA 359

  Fly   334 -------AYPPKPVAGDGP----KKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMT 387
                   ||      |.||    .|:|.......:|:.||..|            .:.|..||| 
 Frog   360 EGRFSFAAY------GMGPACLQAKDGISMKGNNNNNPASSAQ------------PVSKSPDEM- 405

  Fly   388 KNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERL 452
              |::.                                                          :
 Frog   406 --RKLF----------------------------------------------------------I 410

  Fly   453 KRAIYIDRSSRVLFPALFASLNGIYWCVF 481
            .||..||:.||:.||.:|...|..||.::
 Frog   411 SRAKKIDKVSRIGFPLVFLIFNTFYWIIY 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 155/482 (32%)
LGIC_ECD_HisCl 51..235 CDD:349793 68/189 (36%)
Cys-loop 155..169 CDD:349793 5/13 (38%)
glra1XP_002940962.2 LIC 10..439 CDD:273305 155/482 (32%)

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