DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and glra2

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_004912302.1 Gene:glra2 / 100494348 XenbaseID:XB-GENE-958032 Length:488 Species:Xenopus tropicalis


Alignment Length:494 Identity:166/494 - (33%)
Similarity:253/494 - (51%) Gaps:69/494 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CMKHYAKGEFQQSLAITDILPEDIKR---YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYV 75
            |.:|..:......::.:|.|.:.:.|   ||....|..:|.|..|..::.:....||.|.:|.|.
 Frog    27 CKEHDTRSGKSPPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYR 91

  Fly    76 ADVFFAQTWKDHRL---RLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWL 137
            .::|..|||.|.||   ..|::...    |:...|.::|:||.||.|.|...|..:|..|..:.:
 Frog    92 VNIFLRQTWNDPRLSYSEYPDDSLD----LDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRI 152

  Fly   138 YKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELP 202
            :|:..:||.::|||.|||.|:...:|.|.|.|.:|:||..:|.:||||:|..|:|:.|.:.:.||
 Frog   153 FKNGNVLYSIRLTLTLSCPMDLKNFPMDVQTCAMQLESFGYTMNDLIFEWLSTSPVQVADGLTLP 217

  Fly   203 QVAL-IRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAP 266
            |..| ..||...||:.|:||.|||:||.|.|:|::.||:...|||:.:|||:|||||||..:|||
 Frog   218 QFILKEENELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAP 282

  Fly   267 ARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPK 331
            |||.||:|::||::||.:.|::|||.|||:||:|.:|:||.:|||.||:||..:|.|        
 Frog   283 ARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV-------- 339

  Fly   332 PMAYPPKPVAGDGPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTT 396
                         .::..|..    ......|:|:..:.:.:|.:|.:.::....:.:.....|.
 Frog   340 -------------SRQHKEFL----RLRRRQKRQSKTVLVGNESVESVRRMNGLRSTDSSAYGTL 387

  Fly   397 RRVVRPPLDADGPWIPRQESR-------------------IILTPTIAPPPPPPQPAAPEPELPK 442
            .::..|.|..:.   ..:|||                   :..||   |.||||||  .:.:..|
 Frog   388 NQIYNPSLREED---VARESRFNFSGYGMGHCLQVKDGTAVKATP---PIPPPPQP--KDADSIK 444

  Fly   443 PKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
            .|..   :|.||   ||..||..||..|...|..||..:
 Frog   445 KKFV---DRAKR---IDTISRAAFPLAFLIFNIFYWITY 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 164/475 (35%)
LGIC_ECD_HisCl 51..235 CDD:349793 71/187 (38%)
Cys-loop 155..169 CDD:349793 5/13 (38%)
glra2XP_004912302.1 LIC 44..477 CDD:273305 164/475 (35%)

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