Protein Alignment ort and gabra5

DIOPT Version :9

• Sequence 1: NP_524406.1
• Gene: ort / 45910
• FlyBaseID: FBgn0003011
• Length: 485
• Species: Drosophila melanogaster
• Sequence 2: XP_004911866.1
• Gene: gabra5 / 100494208
• XenbaseID: XB-GENE-980292
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 463
• Identity: 139/463 - (30%)
• Similarity: 212/463 - (45%)
• Gaps: 75/463 - (16%)

  Fly    30 TDILPEDIKRYD-KMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRL---- 89
            |.||...:..|| ::||...| :.|.|...:.|.....:.:..|.|..||||.|:|||.||
 Frog    54 TRILDGLLDGYDNRLRPGLGE-RITQVKTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFQG 117

  Fly    90 ---RLPENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTL 151
               |||.|     .||    ...:|.||:||.|.|......:|.||..:.|..|.|:||.::||:
 Frog   118 PMPRLPLN-----NLL----ASKIWTPDTFFHNGKKSIAHNITTPNKLLRLEDDGTLLYTMRLTI 173

  Fly   152 KLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWDPTTP---LVVDENIELPQVALIRNETAD 213
            ...|.|....:|.|...|.|:..|.::...:|.::|...|.   :|.::...|.|..||......
 Frog   174 SAECPMQLEDFPMDAHACPLKFGSYAYPNSELRYEWTNITDKSVVVAEDGSRLNQYHLIGQTVGT 238

  Fly   214 CTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLT 278
            .....|||.:|.:...|.|||::.|:|..||:|..|.||:|.||||:..|:.|||...|||::||
 Frog   239 ENISTSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT 303

  Fly   279 LSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGD 343
            ::|....:::|||.|:|..|:|.|::||..|||.||:|:..:|.            :..:..|.|
 Frog   304 MTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNY------------FTKRSWAWD 356

  Fly   344 GPKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVRPPLDADG 408
            | ||..|.|                         ||:|...|....:.|.:.:.|:
 Frog   357 G-KKALEAA-------------------------KIKKKEQESLGRKPINSYSGRI--------- 386

  Fly   409 PWIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASL 473
            |:.|.. |:.:.:..||      ..|:...:..:.|...:::.......||:.||::||.:|.:.
 Frog   387 PYTPNM-SKDLTSSVIA------NAASIHMKTTEEKCAESKKTYNSVSKIDKMSRIVFPVMFGTF 444

  Fly   474 NGIYWCVF 481
            |.:||..:
 Frog   445 NLVYWATY 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ort	NP_524406.1	LIC	31..481	CDD:273305	138/460 (30%)
		Neur_chan_LBD	38..235	CDD:280998	65/207 (31%)
		Neur_chan_memb	243..>334	CDD:280999	38/90 (42%)
gabra5	XP_004911866.1	LIC	25..452	CDD:273305	139/461 (30%)
		LGIC_ECD_GABAAR_A5	62..260	CDD:349839	65/207 (31%)
		Cys-loop	177..191	CDD:349839	4/13 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910