DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and XB5799637

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:474 Identity:135/474 - (28%)
Similarity:214/474 - (45%) Gaps:96/474 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DILPEDI----KRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRLRL 91
            :|||..|    |.|:|...|..:..|..|...:.:..:|:|.|.:|.|.|.:|..|.|.|.||..
 Frog    11 EILPPTIQKLMKGYNKYLRPFFDNGPVTVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLCF 75

  Fly    92 PEN--MTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLS 154
            ..|  ::.:.||:|:     :|.||:|..::|......||:.|..:.:|.:.|:||.:::|..::
 Frog    76 ESNKSLSLDGRLVEL-----LWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTVLYALRITTTVA 135

  Fly   155 CIMNFAIYPHDTQECKLQMESLSHTTDDLIFQW----DPTTPLVVDENIELPQVALIRNETADCT 215
            |.|:...||.|.|.|.| :||.|:.|:|::|.|    |....|   :.:.|.|.|:..:.|:...
 Frog   136 CSMDLTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGL---DALRLAQYAVEDHYTSVSE 197

  Fly   216 QVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLS 280
            .||.||.:..|...|.|||.::|::..||:|:.::|::|||||||...:.|||:.:|||::||::
 Frog   198 AVYETGRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSFWISLSSVPARICIGVTTVLTMT 262

  Fly   281 TQHAKSQSSLPPVS-YLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDG 344
            |....:::|||..: ::||:|.::.:|..|:|.||:||.:.:......|..|             
 Frog   263 TLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHFYTLHQPHQK------------- 314

  Fly   345 PKKEGEGAPPGGSNSTASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVRPPLDADGP 409
                         |||..|..|.                ||...|..|...          :||.
 Frog   315 -------------NSTIKKLVAE----------------DEADMNGTISAV----------SDGQ 340

  Fly   410 WIPRQESRIILTPTIAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIY---------IDRSSRVL 465
                           :....||.......:..|..:.|..:||....|         ||..||:.
 Frog   341 ---------------SHQTEPPDEIGNGKKKIKSPVDPVLKRLLCVFYCFQVQNPHDIDNYSRIS 390

  Fly   466 FPALFASLNGIYWCVFYEY 484
            ||..|..:|..|| .:|.|
 Frog   391 FPLSFMIINVFYW-AYYLY 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 133/469 (28%)
Neur_chan_LBD 38..235 CDD:280998 64/202 (32%)
Neur_chan_memb 243..>334 CDD:280999 35/91 (38%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 133/470 (28%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 60/188 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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