DRSC/TRiP Functional Genomics Resources

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Protein Alignment ort and glra3

DIOPT Version :10

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:448 Identity:153/448 - (34%)
Similarity:224/448 - (50%) Gaps:74/448 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRL---RLPENMTQEYRL 101
            ||....|..:|.|..|..::.|....||.|.:|.|..::|..|.|.|.||   ..|::...    
 Frog    57 YDARIRPNFKGPPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEYPDDSLD---- 117

  Fly   102 LEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDT 166
            |:...|.::|:||.||.|.|...|..:|..|..:.::||..:||.::|||.|||.|:...:|.|.
 Frog   118 LDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDV 182

  Fly   167 QECKLQMESLSHTTDDLIFQWDPTTPLVVDENIELPQVALIRNETAD---CTQVYSTGNFTCLEV 228
            |.|.:|:||..:|.:||||:|....|:.:.:.:.|||..|  .|..|   ||:.|:||.|||:||
 Frog   183 QTCIMQLESFGYTMNDLIFEWQENGPVQIADGLTLPQFVL--KEEKDLRYCTKHYNTGKFTCIEV 245

  Fly   229 VFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPV 293
            .|.|:|::.||:...|||:.:|||:|||||||..:||||||.||:|::||::||.:.|::|||.|
 Frog   246 RFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKV 310

  Fly   294 SYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVAGDGPKKEGEGAPPGGSN 358
            ||:||:|.:|:||.:|||.||:||..:|.|                                   
 Frog   311 SYVKAIDIWMAVCLLFVFSALLEYAAVNFV----------------------------------- 340

  Fly   359 STASKQQATMLPLADEKIEKIEKIFDEMTKNRRIVTTTRRVVRPPLDADGPWIPRQESRIILTPT 423
               |:|...:|...    .|.:|..|:..:..|...|...:        ||.:..::.       
 Frog   341 ---SRQHKELLRFR----RKRKKDRDDDVRESRFSFTAYGM--------GPCLQAKDG------- 383

  Fly   424 IAPPPPPPQPAAPEPELPKPKLTPAQERLKRAIYIDRSSRVLFPALFASLNGIYWCVF 481
            :.|..|...|.||:......|:.     :.||..||..||..||..|...|..||.::
 Frog   384 VNPKGPLNAPPAPKTHEEMRKVF-----IDRAKKIDTLSRACFPLAFLIFNIFYWVIY 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:455710 153/446 (34%)
LGIC_ECD_HisCl 51..235 CDD:349793 70/189 (37%)
Cys-loop 155..169 CDD:349793 5/13 (38%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 153/446 (34%)

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