DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ort and LOC100001259

DIOPT Version :9

Sequence 1:NP_524406.1 Gene:ort / 45910 FlyBaseID:FBgn0003011 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_021336767.1 Gene:LOC100001259 / 100001259 -ID:- Length:369 Species:Danio rerio


Alignment Length:327 Identity:110/327 - (33%)
Similarity:172/327 - (52%) Gaps:15/327 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FQQSLAI-TDILPEDIKRYDKMRPPKKEGQPTIVYFHVTVMGLDSIDENSMTYVADVFFAQTWKD 86
            |:.::.: |.||...:..||....|....:.|.|...:.|.....:.:..|.|..||||.|:|||
Zfish    32 FKNNITLFTRILDRLLDGYDNRLRPGLGDRVTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKD 96

  Fly    87 HRLRL--PENMTQEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYMWLYKDKTILYMVKL 149
            .||:.  |.|:.:...|:    ...:|.||:||.|.|......||:||..:.:..|.|:||.::|
Zfish    97 ERLKFEGPMNILRLNNLM----ASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRL 157

  Fly   150 TLKLSCIMNFAIYPHDTQECKLQMESLSHTTDDLIFQWD---PTTPLVVDENIELPQVALIRNET 211
            |:...|.|:...:|.|...|.|:..|.::||.::.:.|.   ..:.:|.:|:..|.|..|:....
Zfish   158 TVHAECPMHLEDFPMDFHSCPLKFGSYAYTTTEVTYTWTKNASNSVVVEEESSRLNQYDLLGQTV 222

  Fly   212 ADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSL 276
            .:.|...|||.:|.:...|.|||::.|:|..||:|..|.||:|.||||:..|:.|||...|||::
Zfish   223 GNETIRSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTV 287

  Fly   277 LTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVLSDTPIPKPMAYPPKPVA 341
            ||::|....:::|||.|:|..|:|.|::||..|||.||:|:..:|....     :..|:..|.|.
Zfish   288 LTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK-----RGWAWDGKSVV 347

  Fly   342 GD 343
            .|
Zfish   348 ND 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ortNP_524406.1 LIC 31..481 CDD:273305 108/318 (34%)
Neur_chan_LBD 38..235 CDD:280998 61/201 (30%)
Neur_chan_memb 243..>334 CDD:280999 38/90 (42%)
LOC100001259XP_021336767.1 Neur_chan_LBD 7..>350 CDD:332142 110/327 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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