DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and CCP3

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_180096.3 Gene:CCP3 / 817062 AraportID:AT2G25240 Length:385 Species:Arabidopsis thaliana


Alignment Length:383 Identity:121/383 - (31%)
Similarity:183/383 - (47%) Gaps:40/383 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LFKEIIKSQSQ-QNVVFSPFSVHALLALIYGASDGKT------FRELQKAGEFSKNAMAVAQDFE 171
            |.|.:|.:.:. .|:||||.|::.||:||...|...|      |..|......:   :.:||..:
plant    17 LTKHVIATVANGSNLVFSPISINVLLSLIAAGSCSVTKEQILSFLMLPSTDHLN---LVLAQIID 78

  Fly   172 SVIKYKKHLEGAD--LTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDM-QNAKDTAAKINA 233
            .      ..|.:|  |::|..|:.:: ...:..|:.:..:..:.|....||. ....:...::|.
plant    79 G------GTEKSDLRLSIANGVWIDK-FFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNT 136

  Fly   234 WVMDTTRNKIRDLVTPTDVDP--QTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVAM 296
            |....|...|:.:::...:|.  .:..:|.|||||:|.|..:|....|...||...:|...||..
plant   137 WAEVHTNGLIKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPF 201

  Fly   297 MFN-DDVYGLAELPELGATALELAYKDSAT--SMLILLPNETTGLGKMLQQL-SRPEFDLNRVAH 357
            |.| :|.| |....  |...|.|.|.:...  ||.|.|||:..||..:|::: |.|.|..|.:. 
plant   202 MTNYEDQY-LRSYD--GFKVLRLPYIEDQRQFSMYIYLPNDKEGLAPLLEKIGSEPSFFDNHIP- 262

  Fly   358 RLRRQSV-AVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP-----VRVSKILQKAY 416
             |...|| |.|:|||:|.||.:.:|.||::|:...|.....:|:::|.|     :.||.||.||.
plant   263 -LHCISVGAFRIPKFKFSFEFNASEVLKDMGLTSPFNNGGGLTEMVDSPSNGDDLYVSSILHKAC 326

  Fly   417 INVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPAS--VLFIGHVEYPT 472
            |.|.|.||||:|.|.......|....| :|||:|||:|.||...|  :||:|.|..|:
plant   327 IEVDEEGTEAAAVSVGVVSCTSFRRNP-DFVADRPFLFTVREDKSGVILFMGQVLDPS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 119/377 (32%)
CCP3NP_180096.3 plant_SERPIN 8..382 CDD:238998 120/380 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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