DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and SRP2

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:400 Identity:101/400 - (25%)
Similarity:168/400 - (42%) Gaps:70/400 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 KEIIKSQSQ----------------QNVVFSPFSVHALLALIYGASDGKTFRE-----LQKAGEF 159
            :|.:|:|::                .|.||||.|::|:|.:....:|.||.|.     |:.:...
plant    32 QEAMKNQNEVSLLLVGKVISAVAKNSNCVFSPASINAVLTVTAANTDNKTLRSFILSFLKSSSTE 96

  Fly   160 SKNAMAVAQDFESVIKYKKHLE--GADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQ 222
            ..|  |:..:..||: :|...|  |..:.....|:..:.| ..|..:::....:|.|....||.:
plant    97 ETN--AIFHELASVV-FKDGSETGGPKIAAVNGVWMEQSL-SCNPDWEDLFLNFFKASFAKVDFR 157

  Fly   223 N-AKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQH 286
            : |::....:|.|....|.:.|::::....|...|..:..||:||:|.||..|....|....|..
plant   158 HKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHL 222

  Fly   287 TNGRISKVAMMFNDDVYGLAELPELGATALELAYKDSAT------SMLILLPNETTGLGKMLQQL 345
            .||:...|..|.:.:...:....  |...|.|.|:....      ||.:.||::...|..:|:::
plant   223 LNGKSVSVPFMRSYEKQFIEAYD--GFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELDNLLERI 285

  Fly   346 -SRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLK----NLGVHQMFTPNSQVTKLMDQP 405
             |.|.| |:......|......|:|||:.||..:.:....    |:.:|                
plant   286 TSNPGF-LDSHIPEYRVDVGDFRIPKFKIEFGFEASSVFNDFELNVSLH---------------- 333

  Fly   406 VRVSKILQKAYINVGEAGTEASAASYAKFVPLSL---PPKPTEFVANRPFVFAVR--TPASVLFI 465
                   |||.|.:.|.||||:||:....|..|.   |.|..:|||:.||:|.:|  ...::||.
plant   334 -------QKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLLFA 391

  Fly   466 GHVEYPTPMS 475
            |.:..|:.:|
plant   392 GQIFDPSELS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 99/391 (25%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 98/390 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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