DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and serpine3

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001116709.1 Gene:serpine3 / 556612 ZFINID:ZDB-GENE-050309-223 Length:417 Species:Danio rerio


Alignment Length:400 Identity:101/400 - (25%)
Similarity:187/400 - (46%) Gaps:42/400 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SYMD---RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAV 166
            |:.|   :|...|::.:.:::::.|::.||.||...|.|:...:.|.|..:|:....:..|.:.|
Zfish    29 SFSDLHTQFGISLYQTLTETENKSNLIVSPASVSLCLGLLQLGARGNTLVQLEGTLGYDVNDVRV 93

  Fly   167 AQDFESVIK-----YKKHLEGADLTLATKVYYNRELGGVN--HSYDEYAKFYFSAGTEAVDMQNA 224
                ::::.     .....||..|.||..::...   ||.  ..:.::|..:.:....:|:..|.
Zfish    94 ----QNILSRPQGDLANSSEGLRLQLANALFIQT---GVKLLPEFTQHALGWGNTSLLSVNFSNP 151

  Fly   225 KDTAAKINAWV-----MD---TTRNKIR----DLVTPTDVDPQTQALLVNAVYFQGRWEHEFATM 277
            ..|.:::..|.     .|   .||.::.    :....|..|......||:.:.|.|.|:.:|...
Zfish   152 NHTHSRLQQWAHYQSKADDHLQTREELHHSSGEEEEATRQDHLLYMALVSTLVFHGAWQKQFLFT 216

  Fly   278 DTSPYDFQHTNGRISKVAMMFNDDVYGLA--ELP-ELGATALELAYKDSATSMLILLPNE-TTGL 338
            :|....|..::|...||.||:......:.  .|| |...|.|||.|.|.:..:|:.||:: .|.|
Zfish   217 ETQNLPFTFSDGSTVKVPMMYQSSEVNIGHFRLPSEQEYTVLELPYLDHSLRLLVALPSDRKTPL 281

  Fly   339 GKMLQQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD 403
            .::.:|::.....|....  |||..:.:.||:|:.:.:.::...|::|||..:|:|::...:.:.
Zfish   282 SQLEKQITARAVGLWDTG--LRRTKMDIFLPRFKMQSKINLKPVLQSLGVSDIFSPSAADFRGIS 344

  Fly   404 QP--VRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVR--TPASVLF 464
            ..  :.||:...:|.|.|.||||:|::|:....:..|   :...|.|:|||:|.:|  :..|:||
Zfish   345 DTDGIFVSEAFHEARIEVTEAGTKAASATAMVLLKRS---RSAVFKADRPFLFILRQISTGSLLF 406

  Fly   465 IGHVEYPTPM 474
            ||.|..|..|
Zfish   407 IGRVVNPADM 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 97/389 (25%)
serpine3NP_001116709.1 Serpin 35..413 CDD:278507 97/389 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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