DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Serpinb3a

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_006249702.1 Gene:Serpinb3a / 498209 RGDID:1562868 Length:387 Species:Rattus norvegicus


Alignment Length:400 Identity:119/400 - (29%)
Similarity:198/400 - (49%) Gaps:59/400 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNA------MAVA 167
            :|:.||::::  ..|:.|:.:||.|:...||::...:.|.|.::::|..:|.:..      .|..
  Rat    10 QFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKVIQFHETTKKTTEKSADC 72

  Fly   168 QDFESV--------IKYKKHLEGADLTLATKVYYNRELGGVNH-----SYDEYAKFYFSAGTEAV 219
            .|.|||        .:..|..:..||..|..:|      |..|     ::.|..|.|:.|..|::
  Rat    73 HDEESVHEQFQKLMTQLNKSNDAYDLNSANSIY------GAKHFPFLQTFLEDIKEYYQANVESL 131

  Fly   220 DMQN-AKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYD 283
            |..: |:::..|||:||.:.|..||:||.....::..|..:|||||||:|:|.|:|        |
  Rat   132 DFAHAAEESEKKINSWVENQTNGKIKDLFPKGSLNSSTILVLVNAVYFKGQWNHKF--------D 188

  Fly   284 FQHT-------NGRISK-VAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGK 340
            .:||       |...|| |.||...:.:....|.::.|..:|:.||....||.||||.|..||.|
  Rat   189 EKHTEEDKFWLNKNTSKPVQMMRQKNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKK 253

  Fly   341 MLQQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMD-- 403
            :.:||:..:......|..:....:.:.||:|:.|.:.|:..||:::|:...|.     :|..|  
  Rat   254 LEEQLTADKLLEWTRAENMNMIDLYLSLPRFKVEEKYDLPGPLQHMGMVDAFD-----SKKADFS 313

  Fly   404 -----QPVRVSKILQKAYINVGEAGTEASAASYAKFVPLSLPPKPTEFVANRPFVFAVRTPA--S 461
                 |.:.|||:|.|:::.|.|.||||:||:..: |.|:......:|..:.||:|.::..|  |
  Rat   314 GMSSTQGLMVSKVLHKSFVEVNEEGTEAAAATGVE-VSLTSAQITEDFNCDHPFLFLIKHNATNS 377

  Fly   462 VLFIGHVEYP 471
            :||.|.:..|
  Rat   378 ILFFGRMSSP 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 118/395 (30%)
Serpinb3aXP_006249702.1 SERPIN 5..387 CDD:294093 118/398 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.730

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