DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Spn28F

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster


Alignment Length:376 Identity:118/376 - (31%)
Similarity:205/376 - (54%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 RFSSELFKEIIKSQSQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESV 173
            ||:.:.::.:.|..:..|::.||.||...|::.|..:..||.:|:       :|.:.:..|.:.|
  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEM-------RNVLKLPDDKKEV 73

  Fly   174 -IKYK---KHLEG----ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAK 230
             .|||   ..|||    |.|:||.::|.|::...| .||::..|..|.|..||:|:.:....::.
  Fly    74 AAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLV-PSYNQMVKDSFMAEAEAIDIVDPNKASSI 137

  Fly   231 INAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRISKVA 295
            :|.||.:.||.||:|||:..|:. :.:.:::||:||:|:||::|....|...:|:.::.:...|.
  Fly   138 VNNWVDNQTRGKIKDLVSSNDMS-KMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVE 201

  Fly   296 MMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQL--SRPEFDLNRVAHR 358
            ||.....:..|...||||..:||.|::|:.||||.||::..||.::.:::  .:|         :
  Fly   202 MMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKP---------K 257

  Fly   359 LRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKLMDQP-VRVSKILQKAYINVGEA 422
            |.:..|.:|||||:.||...:.:.|..:|:...|..::....|::.. |.|.|::.||:|.|.|.
  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEE 322

  Fly   423 GTEASAASYAKFVPLSLPPKPTEFV--ANRPFVFAVRTPASVLFIGHVEYP 471
            |.||:||:...||..|:|...::.|  |:.||.:.:|...::.|.||...|
  Fly   323 GAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 116/371 (31%)
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 116/371 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
87.850

Return to query results.
Submit another query.