DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nec and Spn27A

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001260143.1 Gene:Spn27A / 45815 FlyBaseID:FBgn0028990 Length:447 Species:Drosophila melanogaster


Alignment Length:386 Identity:119/386 - (30%)
Similarity:187/386 - (48%) Gaps:36/386 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 DRFSSELFKEIIKSQ-SQQNVVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFE 171
            |.||..|.|.::::: :.:||:.|||||..:|||:..|:...|..:::.|     |.....:...
  Fly    74 DPFSWHLLKTVLQNETADKNVIISPFSVKLVLALLAEAAGAGTQTQVELA-----NTQTDIRSQN 133

  Fly   172 SVIK-YKKHLEG--------ADLTLATKVYYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDT 227
            :|.: |:|.|..        ..|::.||::.:..: .....:....|.::.:..||:|..|.:..
  Fly   134 NVREFYRKTLNSFKKENQLHETLSVRTKLFTDSFI-ETQQKFTATLKHFYDSEVEALDFTNPEAA 197

  Fly   228 AAKINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGRWEHEFATMDTSPYDFQHTNGRIS 292
            |..||||..:.|:.:::.||.|.:|..... ||.|.:||.|.|..:|||  |....|..:....|
  Fly   198 ADAINAWAANITQGRLQQLVAPDNVRSSVM-LLTNLIYFNGLWRRQFAT--TFQGSFFRSKDDQS 259

  Fly   293 KVAMMFNDDVYGLAELPELGATALELAYKDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAH 357
            :...|...|.:......:|.|..|.|.|| ...|:.:|||....|:..:::.|...|  |.....
  Fly   260 RAEFMEQTDYFYYTTSEKLKAQILRLPYK-GKNSLFVLLPYALNGIHDLVKNLENDE--LKSAQW 321

  Fly   358 RLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPNSQVTKL-----MDQPVRVSKILQKAYI 417
            .:....|.|.||||.|:::|::.|.|::|||.::|..::.:..|     :...|:||.|||||.|
  Fly   322 AMEEVKVKVTLPKFHFDYQQNLKETLRSLGVREIFEDSASLPGLTRGADVAGKVKVSNILQKAGI 386

  Fly   418 NVGEAGTEASAASYA----KFVPLSLPPKPTEFVANRPFVFAV--RTPASVLFIGHVEYPT 472
            ||.|.||||.||:..    ||   .......||..||||||.:  .:..::||.|.|..||
  Fly   387 NVNEKGTEAYAATVVEIENKF---GGSTAIEEFNVNRPFVFFIEEESTGNILFAGKVHSPT 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 116/380 (31%)
Spn27ANP_001260143.1 SERPIN 72..440 CDD:238101 116/380 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBFJ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.930

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