DRSC/TRiP Functional Genomics Resources

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Protein Alignment nec and Spn100A

DIOPT Version :9

Sequence 1:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_651818.1 Gene:Spn100A / 43642 FlyBaseID:FBgn0039795 Length:649 Species:Drosophila melanogaster


Alignment Length:478 Identity:104/478 - (21%)
Similarity:184/478 - (38%) Gaps:139/478 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AQTFAQELIAWQRQQQQQQQQQLQLQQQ------LLL---------------QQQQHQRNPRPEL 61
            ||..|:.|   |::|:||...:.:|:.|      |.:               ::||::|:.:.|.
  Fly   237 AQAEAELL---QKEQKQQATTESELESQPEETTTLSVEKQEKPDMAAEENPAEKQQNKRSDQEES 298

  Fly    62 GLRSLPGNPWTQNNQEAISDVVAVDLTKREPVTPPPNRPPPVFSYMDRFSSELFKEIIKSQSQQN 126
            .:::|..|...|..::....:.|..||..||.                      |..:..|..:|
  Fly   299 QIKNLEENETVQEEEKLAKIMAAPALTAGEPE----------------------KVRLPLQKLEN 341

  Fly   127 VVFSPFSVHALLALIYGASDGKTFRELQKAGEFSKNAMAVAQDFESVIKYKKHLEGADLTLATKV 191
            .|.:            .|.||..                     |.::..:.||.          
  Fly   342 AVKT------------AAKDGAD---------------------EIMLALESHLP---------- 363

  Fly   192 YYNRELGGVNHSYDEYAKFYFSAGTEAVDMQNAKDTAAKINAWVMDTTRNKIRDLVTPTDVDPQT 256
                .:..||             |..::..|:...:|...|:             :|......::
  Fly   364 ----SVSRVN-------------GARSLFQQDDITSALSANS-------------ITGRSAGSKS 398

  Fly   257 QALLVNAVYFQGRWEHEFATM-DTSPYDFQHTNGRISKVAMMFNDDVYGLAELPELGATALELAY 320
            :.||.|.:|::|.|.:.|..: |.|...|..||....|..||.....:.:|:||::.|..|.|.|
  Fly   399 KMLLFNGLYYRGSWANPFYQLRDGSDEFFFMTNEDAVKAPMMHARGKFQVADLPQVKARVLSLPY 463

  Fly   321 KDSATSMLILLPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKN 385
            :.|..::.|:||:||.||..::.||...:|.|.:  .:.:.:.:.:.:||||.|........||.
  Fly   464 ETSRYALCIVLPDETEGLSDVISQLQTSDFLLAK--KQFQMKELHISMPKFQVEETSRSEAMLKQ 526

  Fly   386 LGVHQMFT-PNSQVTKLMDQP-VRVSKILQKAYINVGEAGTEASAASYAKF-----------VPL 437
            :|:.::|: ..:|::.|.:.| |.|.:|:|...:.|.|.|:.|::.|.|..           :|:
  Fly   527 MGLKKVFSRTEAQLSLLSEDPDVHVDEIVQFVNVRVDEGGSSANSLSAATMQARTPSVESTVLPV 591

  Fly   438 SLP----PKPTEFVANRPFVFAV 456
            ..|    |....|..||||.:.:
  Fly   592 PEPEPELPGVERFEVNRPFAYFI 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
necNP_524851.1 SERPIN 108..468 CDD:238101 81/367 (22%)
Spn100ANP_651818.1 SERPIN 41..>148 CDD:294093
SERPIN <380..628 CDD:294093 67/250 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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